Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011923.1 Kokia drynarioides strain JFW-HI SEQ_126921, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  142604

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--29
2
14.5
2
100
0
58
48
0
0
51
1.00
7191--7235
24
2.0
23
83
12
58
51
4
2
42
1.34
7298--7351
19
2.9
19
76
10
58
61
0
0
38
0.96
7279--7361
35
2.4
32
80
15
85
61
1
0
37
1.04
7721--7769
20
2.5
19
80
9
53
53
8
6
32
1.55
9975--10022
2
24.0
2
100
0
96
50
0
0
50
1.00
17089--17896
209
3.9
209
89
1
1206
37
19
21
21
1.94
18263--18345
17
4.9
17
76
8
80
33
0
3
62
1.12
18266--18345
34
2.4
33
83
8
99
35
0
3
61
1.14
20061--20363
30
10.3
29
71
14
194
33
25
4
36
1.77
20239--20348
28
3.9
28
71
11
80
32
30
4
32
1.78
20164--20364
57
3.5
57
77
10
160
32
27
4
35
1.78
21217--21253
15
2.4
16
95
4
67
29
16
10
43
1.82
23464--23537
23
3.2
23
64
17
62
27
29
10
32
1.90
23462--23542
24
3.4
24
66
17
69
27
29
9
33
1.89
23447--23541
47
2.0
47
100
0
190
29
27
10
32
1.90
24904--24934
2
16.0
2
93
6
55
51
0
0
48
1.00
26219--26285
33
2.1
32
81
15
77
28
10
10
50
1.69
30282--30307
13
2.0
13
100
0
52
30
15
15
38
1.88
44447--44618
82
2.1
82
97
1
326
38
22
19
19
1.93
54760--54867
47
2.3
47
95
3
193
42
1
34
21
1.64
58415--58463
21
2.3
21
85
0
62
69
8
2
20
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58742--58794
22
2.7
18
71
20
52
54
15
9
20
1.68
60762--60809
19
2.5
19
73
6
53
68
2
4
25
1.18
62467--62508
23
1.9
21
90
9
66
52
2
0
45
1.13
62909--62951
20
2.1
20
86
4
59
41
4
2
51
1.35
62929--63036
58
1.9
57
83
9
143
40
3
5
50
1.44
63949--63988
14
2.7
15
84
11
55
52
0
0
47
1.00
64018--64052
3
11.7
3
87
0
52
5
34
0
60
1.21
64120--64146
8
3.4
8
100
0
54
51
14
11
22
1.73
70578--70612
17
1.9
19
88
11
56
31
5
5
57
1.46
78379--78420
18
2.3
18
88
8
59
28
0
7
64
1.20
78419--78470
24
2.2
24
82
3
61
73
1
0
25
0.94
83503--83545
22
2.0
22
81
9
52
37
4
0
58
1.19
93148--93172
13
1.9
13
100
0
50
68
0
0
32
0.90
93209--93241
15
2.1
16
88
5
50
78
3
0
18
0.87
104221--104291
31
2.3
31
85
9
108
49
5
7
38
1.54
107888--107913
2
13.0
2
100
0
52
0
0
50
50
1.00
131469--131508
20
2.0
20
95
0
71
57
15
7
20
1.61
134416--134511
41
2.3
41
85
3
122
35
23
6
34
1.80
135282--135376
47
2.0
47
100
0
190
30
23
6
40
1.79
137888--137929
21
2.0
21
90
4
66
73
0
4
21
1.01
139076--139127
27
1.9
27
84
0
68
28
36
23
11
1.90
139417--139450
17
2.0
17
94
0
59
44
0
2
52
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
141976--142118
72
2.0
71
98
0
268
22
28
29
18
1.97

Tables:   1

The End!