Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011925.1 Kokia drynarioides strain JFW-HI SEQ_126923, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  187545

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1741--1805
28
2.3
28
79
12
71
46
6
4
43
1.49
3746--3797
19
2.8
19
77
11
56
42
0
5
51
1.25
14070--14320
84
3.0
84
91
0
403
41
5
4
48
1.47
14291--14324
17
2.0
17
88
0
50
38
8
0
52
1.33
14419--14476
22
2.6
22
80
0
71
34
34
8
22
1.85
15491--15539
21
2.3
21
89
3
71
22
6
2
69
1.21
16755--16809
23
2.3
24
78
12
69
23
12
3
60
1.49
16719--16782
30
2.1
30
88
0
92
26
4
4
64
1.33
17620--18114
61
8.2
61
80
8
430
36
16
17
29
1.92
17620--18114
60
8.2
61
81
7
491
36
16
17
29
1.92
17628--18087
183
2.5
179
83
7
565
37
16
16
30
1.91
19758--19812
23
2.3
24
78
12
69
23
12
3
60
1.49
19722--19785
30
2.1
30
88
0
92
26
4
4
64
1.33
20623--21117
61
8.2
61
80
8
430
36
16
17
29
1.92
20623--21117
60
8.2
61
81
7
491
36
16
17
29
1.92
20631--21090
183
2.5
179
83
7
565
37
16
16
30
1.91
26560--26618
31
1.9
31
82
6
75
35
10
10
44
1.72
54772--54837
29
2.3
29
80
12
73
36
1
1
60
1.15
99204--99281
39
2.0
39
100
0
156
51
12
25
10
1.71
101735--102328
116
5.1
117
75
6
336
28
22
17
31
1.96
104241--104282
5
8.4
5
94
0
75
21
21
35
21
1.96
104432--104473
15
2.5
17
77
18
52
69
4
7
19
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105071--105112
2
21.5
2
95
4
77
52
0
0
47
1.00
105215--105283
27
2.5
27
81
6
86
60
0
5
33
1.20
105441--105465
2
12.5
2
100
0
50
52
0
0
48
1.00
116752--116776
8
3.1
8
100
0
50
12
0
48
40
1.40
117602--117635
13
2.5
13
85
4
50
44
17
0
38
1.49
125567--125721
60
2.6
60
78
7
172
32
14
16
36
1.89
125733--125885
58
2.5
60
78
12
163
45
13
11
29
1.79
125975--126090
56
2.1
53
84
4
142
31
14
17
37
1.90
180467--180582
56
2.1
56
96
0
214
51
9
3
35
1.51
180467--180564
26
3.6
25
71
20
81
51
9
3
36
1.50
181668--181699
16
2.0
16
93
0
55
28
0
0
71
0.86
181657--181702
23
2.0
23
83
8
58
30
4
0
65
1.12
185139--185198
23
2.6
23
76
5
59
10
21
21
46
1.80
185180--185260
23
3.6
22
81
5
90
13
19
27
39
1.89
185736--185774
20
1.9
21
84
5
53
33
10
2
53
1.48

Tables:   1

The End!