Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001193.1 Kokia drynarioides strain JFW-HI SEQ_112536, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51095

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
132--209
32
2.4
32
85
4
104
29
2
19
48
1.62
1157--1193
19
1.9
19
88
0
56
29
5
21
43
1.75
1292--1393
46
2.2
46
91
0
159
29
12
17
40
1.87
1576--1634
22
2.6
23
75
15
59
64
3
1
30
1.20
2491--2527
18
2.1
18
90
5
58
54
0
2
43
1.14
2666--2718
26
2.0
26
100
0
106
41
39
0
18
1.51
4016--4167
30
5.1
30
77
7
130
38
19
3
37
1.71
4066--4181
30
3.9
30
84
8
123
37
16
3
42
1.65
4544--4692
80
1.9
80
98
0
289
28
10
16
43
1.82
7747--7859
58
1.9
58
84
12
151
55
12
22
9
1.65
8447--8486
16
2.5
15
84
11
53
80
0
20
0
0.72
8464--8583
61
1.9
63
90
9
194
55
12
21
10
1.65
9450--9529
15
5.3
15
82
13
85
82
0
16
1
0.73
9449--9531
22
3.9
21
74
23
75
80
0
18
1
0.77
10873--11133
45
5.9
45
82
4
273
33
26
16
23
1.96
10871--11177
134
2.4
132
84
6
385
33
25
16
24
1.96
10873--11212
89
4.0
89
78
9
322
33
26
16
23
1.96
13653--13731
31
2.6
31
85
2
106
30
11
8
49
1.69
13653--13715
30
2.1
30
90
3
99
30
11
9
49
1.70
13941--14091
29
5.2
29
62
3
88
45
11
18
23
1.83
13944--14112
59
2.9
58
83
3
214
43
12
18
25
1.85
13944--14089
57
2.5
57
85
2
193
43
12
19
24
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14447--14591
72
2.0
72
100
0
290
27
22
12
37
1.90
38996--39059
26
2.5
26
76
0
65
21
25
21
31
1.98
42730--42778
21
2.3
20
80
13
53
4
30
0
65
1.11
46612--46649
9
4.2
9
100
0
76
0
0
42
57
0.98
46618--46661
18
2.4
18
84
3
52
2
4
34
59
1.30

Tables:   1

The End!