Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011932.1 Kokia drynarioides strain JFW-HI SEQ_126930, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60090

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47--82
2
18.0
2
100
0
72
50
0
0
50
1.00
10204--10276
33
2.2
33
100
0
146
27
20
20
31
1.97
11024--11057
6
5.5
6
86
6
50
64
0
2
32
1.08
16823--16851
12
2.4
12
100
0
58
24
0
6
68
1.13
18703--19273
280
2.0
279
97
0
1079
30
15
15
38
1.89
20946--20993
20
2.3
20
82
3
60
33
35
0
31
1.58
21451--21485
3
11.7
3
100
0
70
34
0
0
65
0.93
21543--21619
41
1.9
40
94
2
136
41
2
2
53
1.28
22001--22076
30
2.6
28
76
13
73
48
6
0
44
1.28
23760--23811
26
2.0
26
85
7
70
55
5
0
38
1.24
29469--29493
5
5.0
5
100
0
50
0
0
40
60
0.97
30111--30189
40
2.0
40
90
7
126
29
18
17
34
1.95
35027--35121
39
2.4
40
92
1
156
29
21
16
32
1.95
37297--37346
24
2.1
24
88
7
75
50
6
4
40
1.46
48555--48611
30
1.9
30
92
0
96
26
15
14
43
1.85
49057--49206
80
1.9
79
91
1
246
39
12
14
34
1.83
49192--49281
47
1.9
47
84
4
119
45
8
8
36
1.67
49236--49405
80
2.1
81
88
1
252
45
11
10
32
1.74
52693--52734
23
1.9
22
85
9
59
45
4
0
50
1.23
52954--53001
18
2.7
18
87
6
62
35
6
0
58
1.23
53636--53749
55
2.1
54
81
4
131
28
21
34
14
1.94
53993--54040
24
2.0
24
95
0
87
47
12
8
31
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56000--56028
12
2.3
13
94
5
51
48
10
0
41
1.37
59831--59883
20
2.7
19
73
5
52
56
0
0
43
0.99

Tables:   1

The End!