Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011943.1 Kokia drynarioides strain JFW-HI SEQ_126941, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  322276

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--50
2
19.5
2
100
0
78
51
0
0
48
1.00
9133--9163
3
10.0
3
93
6
53
67
0
0
32
0.91
19301--19353
23
2.2
25
75
21
60
56
3
0
39
1.17
22694--22740
2
23.5
2
91
0
76
48
0
4
46
1.21
26883--26976
41
2.3
40
90
3
143
37
3
1
58
1.21
37160--37188
13
2.2
13
100
0
58
20
20
13
44
1.85
49723--49876
81
1.9
81
100
0
308
23
7
18
50
1.72
51771--51873
23
4.5
22
87
3
116
15
16
22
45
1.85
52684--52717
17
1.9
18
94
5
61
50
0
0
50
1.00
52682--52713
15
2.1
16
94
5
57
50
0
0
50
1.00
55768--55830
24
2.6
24
80
7
74
53
0
0
46
1.00
62420--62444
13
1.9
13
100
0
50
40
4
16
40
1.67
62936--62988
24
2.2
24
83
6
63
69
9
1
18
1.25
71779--71923
60
2.4
60
79
8
152
22
16
17
44
1.87
80704--80749
12
3.8
12
85
0
56
34
39
4
21
1.73
82143--82175
17
1.9
17
93
0
57
33
0
6
60
1.21
94917--94956
17
2.4
17
78
0
53
60
5
0
35
1.19
103113--103157
23
2.0
21
87
8
63
31
0
2
66
1.04
105104--105128
3
8.3
3
100
0
50
32
0
36
32
1.58
118569--118598
2
14.5
2
93
6
51
46
0
3
50
1.18
119301--119343
17
2.6
17
74
3
52
39
9
4
46
1.57
120042--120087
20
2.4
19
82
10
58
30
2
6
60
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
123871--123913
18
2.4
18
88
7
61
46
0
0
53
1.00
136551--136682
61
2.1
61
95
1
237
37
5
9
47
1.59
157654--157678
12
2.1
12
100
0
50
40
0
28
32
1.57
161680--161744
31
2.1
31
83
11
80
41
1
1
55
1.18
173395--173460
27
2.5
27
87
4
91
37
7
1
53
1.39
216548--216587
21
1.9
21
89
0
62
12
12
10
65
1.49
222720--222767
24
2.0
24
100
0
96
41
25
8
25
1.83
225758--225804
24
2.0
24
95
0
85
40
14
8
36
1.77
242555--242579
12
2.1
12
100
0
50
40
0
20
40
1.52
246983--247121
46
3.0
46
97
0
260
51
11
8
28
1.67
250193--250231
18
2.2
18
86
4
53
28
7
10
53
1.62
253501--253525
3
8.3
3
100
0
50
0
32
68
0
0.90
254456--254516
30
1.9
32
90
9
99
59
1
11
27
1.42
261008--261232
89
2.5
89
97
0
423
37
17
8
36
1.80
275662--275691
12
2.5
12
100
0
60
33
0
6
60
1.23
276622--277035
210
2.0
209
96
0
765
32
20
15
31
1.94
285033--285258
108
2.1
109
98
1
436
48
7
12
32
1.68
288585--288674
43
2.1
43
95
0
162
40
24
7
27
1.83
298926--298992
29
2.3
28
87
7
98
50
1
4
43
1.31
301649--301721
19
3.8
18
76
7
56
57
8
1
32
1.37
301681--301761
18
4.2
19
70
10
58
59
8
4
27
1.48
301681--301727
18
2.5
19
86
3
60
63
6
2
27
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
308795--308910
57
2.0
57
100
0
232
20
18
20
39
1.92
315851--315898
17
2.8
17
81
6
53
64
4
2
29
1.23
315917--315987
20
3.7
20
66
17
51
66
0
1
32
1.01
315906--315985
27
2.8
29
81
9
94
63
0
2
33
1.08
316040--316127
10
8.9
10
71
14
58
62
5
1
30
1.26
321271--321296
8
3.2
8
100
0
52
61
0
0
38
0.96
321518--321646
49
2.6
49
86
2
161
31
17
10
40
1.84
321973--322156
7
25.6
7
68
14
72
19
0
36
44
1.51
321952--322014
29
2.2
29
82
5
74
25
3
30
41
1.71
321968--322014
15
3.2
15
84
6
69
27
0
27
44
1.55
321935--322156
14
15.4
14
69
13
103
20
1
35
42
1.61
321968--322027
29
2.1
29
83
0
75
25
0
30
45
1.54
322138--322181
18
2.3
19
84
7
54
25
0
36
38
1.56

Tables:   1

The End!