Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011946.1 Kokia drynarioides strain JFW-HI SEQ_126944, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96523

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21--45
13
1.9
13
100
0
50
16
0
32
52
1.44
572--1212
30
21.8
28
79
9
568
34
29
3
32
1.74
573--1212
59
10.9
58
82
8
624
34
29
3
32
1.74
572--1212
89
7.3
87
81
9
646
34
29
3
32
1.74
3315--3340
12
2.2
12
100
0
52
26
38
7
26
1.83
3673--3724
21
2.5
21
75
6
52
30
28
13
26
1.94
22228--22292
33
2.0
33
87
0
94
38
21
13
26
1.91
24271--24300
10
3.0
10
95
0
51
20
3
0
76
0.92
55228--55281
21
2.6
21
85
5
65
38
24
11
25
1.88
60366--60409
21
2.0
22
83
12
56
43
13
2
40
1.57
62348--62630
20
14.6
20
64
18
82
21
15
8
54
1.67
62325--62402
38
1.9
39
82
14
97
17
14
7
60
1.57
62545--62676
40
3.3
39
69
12
90
25
17
6
51
1.68
62603--62648
19
2.3
21
88
7
69
23
21
2
52
1.58
62712--62763
20
2.7
20
81
3
61
25
17
1
55
1.52
63106--63164
21
2.9
20
77
5
73
22
10
1
66
1.31
63346--63493
20
7.4
19
72
15
77
21
13
2
62
1.44
63430--63516
40
2.2
39
81
8
95
29
14
1
54
1.48
63755--63798
18
2.4
18
88
0
61
13
4
4
77
1.08
66828--66868
19
2.2
19
86
8
57
36
2
2
58
1.24
66822--66870
20
2.5
20
80
12
57
36
2
2
59
1.21
69967--70052
35
2.5
35
98
0
163
36
5
3
54
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69984--70044
11
5.4
11
74
3
50
34
4
4
55
1.43
69935--70048
17
6.6
17
71
7
86
34
5
5
55
1.45
69967--70065
17
5.7
17
75
5
83
38
5
4
52
1.42
70787--70825
20
2.0
20
100
0
78
51
0
0
48
1.00
71896--72166
29
9.2
29
72
12
189
34
27
4
33
1.76
71896--72078
29
6.2
30
79
11
191
33
27
3
34
1.75
71899--72283
59
6.6
57
81
7
316
32
26
5
35
1.80
72152--72306
30
5.2
30
69
20
119
29
22
7
40
1.82
72006--72318
59
5.3
58
80
7
269
32
24
6
36
1.80
72145--72342
59
3.3
58
83
9
206
29
22
9
39
1.85
72122--72374
118
2.1
118
81
8
282
30
23
7
38
1.82
72006--72403
118
3.4
117
75
13
268
32
24
7
36
1.82
76114--76148
18
1.9
18
88
0
52
37
0
0
62
0.95
77846--77897
8
6.6
8
78
10
54
48
0
1
50
1.12
82805--82950
73
2.0
73
98
0
283
28
23
19
28
1.98
83816--83848
2
16.5
2
100
0
66
0
51
0
48
1.00
92334--92376
22
2.0
22
95
0
77
23
9
9
58
1.58

Tables:   1

The End!