Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011947.1 Kokia drynarioides strain JFW-HI SEQ_126945, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85302

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3977--4015
18
2.2
17
86
4
51
35
2
5
56
1.35
5311--5353
16
2.8
16
82
10
54
60
2
0
37
1.10
5602--5659
25
2.2
26
79
14
66
32
0
13
53
1.40
8332--8366
3
11.7
3
100
0
70
34
0
0
65
0.93
9290--9448
77
2.1
77
82
8
189
43
23
11
22
1.85
10421--10445
7
3.6
7
100
0
50
12
0
0
88
0.53
17864--17928
31
2.1
31
83
8
80
46
9
0
44
1.35
22118--22226
54
2.0
54
94
0
191
48
19
12
19
1.80
27376--27456
23
3.4
23
86
6
81
9
28
23
38
1.87
27389--27459
23
2.9
25
87
8
110
12
23
22
40
1.88
27484--27792
154
2.0
154
98
0
600
39
10
22
28
1.86
28581--28671
44
2.0
45
91
2
148
24
14
7
53
1.66
30659--30784
23
5.5
22
82
8
121
12
23
23
40
1.89
30661--30784
45
2.7
45
77
10
121
12
22
24
40
1.89
32810--32840
15
2.0
16
93
6
55
74
0
0
25
0.82
37182--37214
17
2.1
16
88
11
50
66
0
6
27
1.15
54530--54564
18
2.0
17
88
5
52
54
2
0
42
1.15
54504--54601
30
3.4
28
76
19
85
51
2
0
46
1.12
54709--54752
23
1.9
23
90
0
70
29
2
2
65
1.16
54815--54848
14
2.4
14
90
5
50
79
0
0
20
0.73
62081--62127
17
2.7
17
81
12
60
25
8
31
34
1.86
71451--71492
22
1.9
22
85
0
57
40
0
7
52
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73466--73501
5
7.2
5
100
0
72
38
0
0
61
0.96
75246--75279
14
2.4
14
95
0
59
70
5
0
23
1.09
82596--82650
27
2.0
27
82
6
67
45
0
3
50
1.19
82712--82769
9
6.3
9
75
20
50
22
0
3
74
0.97
82697--82743
23
2.0
24
83
4
60
21
0
4
74
0.99
82713--82760
8
5.9
8
83
9
53
22
0
2
75
0.91

Tables:   1

The End!