Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011961.1 Kokia drynarioides strain JFW-HI SEQ_126959, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62951

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3579--3631
19
2.8
19
85
5
72
11
1
33
52
1.48
4685--4992
149
2.1
149
99
0
607
21
21
18
37
1.94
10044--10092
20
2.4
20
86
10
64
51
6
0
42
1.27
12864--12896
13
2.6
13
90
4
50
81
0
0
18
0.68
13588--13630
22
2.0
21
86
4
59
44
0
11
44
1.40
13921--13950
6
5.0
6
100
0
60
50
0
0
50
1.00
16507--16553
22
2.1
22
100
0
94
36
12
17
34
1.87
17076--17119
23
2.0
22
86
4
61
38
0
15
45
1.47
30430--30526
33
2.9
33
86
6
133
23
4
21
50
1.66
32268--32362
26
3.7
26
78
4
111
16
5
12
65
1.44
32256--32359
51
2.0
51
88
5
156
19
4
10
65
1.41
33504--33563
27
2.2
27
90
0
93
23
15
11
50
1.76
34932--34998
31
2.3
27
76
14
71
34
7
11
46
1.69
35189--35247
29
2.0
30
83
3
75
45
15
8
30
1.75
36806--36864
10
5.9
10
75
0
64
16
5
22
55
1.60
36811--36864
20
2.7
20
94
0
90
16
5
20
57
1.59
37871--37915
20
2.2
21
84
4
56
60
6
0
33
1.23
48170--48281
51
2.2
51
87
1
154
28
18
10
41
1.84
53295--53333
19
2.1
18
86
13
53
74
5
2
17
1.12
54095--54254
30
5.4
30
85
5
209
35
23
1
39
1.66
54090--54269
58
3.1
58
83
4
218
36
22
2
38
1.69
58907--58943
17
2.2
17
90
9
58
78
0
21
0
0.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59819--59866
21
2.2
22
85
3
71
79
0
20
0
0.74
59819--59866
7
6.7
7
77
13
53
79
0
20
0
0.74
59820--59872
21
2.5
20
85
8
70
73
0
26
0
0.83
60188--60441
112
2.3
106
82
6
278
30
21
9
38
1.86
62774--62951
39
4.6
39
72
0
140
25
31
19
24
1.98
62802--62949
78
1.9
78
90
0
233
26
32
17
23
1.97

Tables:   1

The End!