Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011966.1 Kokia drynarioides strain JFW-HI SEQ_126964, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60668

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2890--2977
34
2.6
34
80
10
101
27
0
14
57
1.37
10945--11006
30
2.1
30
100
0
124
54
6
25
12
1.62
17526--17550
2
12.5
2
100
0
50
52
0
0
48
1.00
19394--19597
30
6.8
29
76
6
140
33
2
25
37
1.71
20768--20807
21
1.9
21
89
0
62
32
2
2
62
1.22
20849--20881
12
3.0
11
91
8
50
57
0
0
42
0.98
21345--21370
7
3.7
7
100
0
52
42
0
0
57
0.98
21621--21693
37
2.0
37
86
5
103
21
19
20
38
1.94
21628--22158
209
2.6
201
79
7
536
24
20
17
38
1.93
21991--22156
85
1.9
86
81
6
203
25
18
16
39
1.91
32501--32550
19
2.5
21
78
12
61
58
6
16
20
1.59
32663--32879
30
7.3
29
80
9
197
38
2
24
34
1.68
32621--32856
118
2.0
119
80
10
270
38
2
24
33
1.71
32612--32879
60
4.5
59
77
12
244
39
2
24
33
1.71
34018--34057
21
1.9
21
84
0
53
32
5
2
60
1.32
37438--37479
6
7.0
6
88
0
57
0
16
7
76
1.00
37431--37479
18
2.7
18
93
0
80
0
14
8
77
0.98
37438--37478
12
3.4
12
93
0
64
0
17
7
75
1.02
46658--46752
17
5.4
17
80
8
93
42
0
5
52
1.24
46686--46752
6
11.2
6
82
10
84
44
0
2
52
1.16
46657--46710
28
1.9
28
88
0
81
37
0
5
57
1.22
46686--46752
23
2.8
24
84
10
84
44
0
2
52
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48360--48581
30
7.7
29
72
14
93
32
24
4
38
1.77
48429--48608
29
6.3
29
78
10
183
32
26
3
38
1.73
48428--48596
57
3.0
57
78
8
193
33
24
3
38
1.73
48428--48608
86
2.1
86
81
4
222
32
25
3
38
1.73
48591--48695
29
3.6
29
74
14
101
32
22
7
37
1.83
48583--48724
58
2.4
58
86
6
198
32
23
6
37
1.80
50341--50569
114
2.0
112
89
5
352
25
30
10
34
1.89
52643--52682
16
2.4
17
83
8
55
35
0
2
62
1.09

Tables:   1

The End!