Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011970.1 Kokia drynarioides strain JFW-HI SEQ_126968, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79362

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4767--4796
15
1.9
16
93
6
53
56
0
0
43
0.99
7614--7718
31
3.5
30
71
10
88
34
14
12
39
1.83
9551--9589
20
2.0
20
89
0
60
53
5
5
35
1.45
10101--10226
59
2.1
59
88
5
184
40
4
10
44
1.60
13725--13766
23
1.9
23
85
9
61
45
2
0
52
1.13
14425--14462
18
2.1
19
85
14
53
71
0
0
28
0.87
19478--19522
19
2.4
19
81
7
56
37
0
4
57
1.19
20936--20987
21
2.5
21
78
6
61
30
25
13
30
1.94
23987--24049
30
2.1
30
88
5
92
22
14
31
31
1.93
24584--24658
24
3.1
24
94
0
123
54
10
10
24
1.66
28109--28146
18
2.0
20
90
10
62
26
2
0
71
1.00
31019--31057
21
1.9
20
89
5
60
33
10
7
48
1.66
33283--33326
18
2.4
18
84
3
52
34
13
13
38
1.84
33293--33331
18
2.2
18
95
0
69
25
12
10
51
1.71
36059--36110
9
5.8
9
77
22
56
51
0
0
48
1.00
36061--36101
19
2.0
21
90
9
68
48
0
0
51
1.00
36064--36134
28
2.4
30
93
4
119
53
0
1
45
1.09
36897--36957
18
3.4
18
70
30
58
54
0
0
45
1.00
36907--36949
22
2.0
23
86
9
63
53
0
0
46
1.00
37113--37170
30
2.0
28
83
9
73
60
12
15
12
1.59
40794--40842
20
2.5
20
75
15
57
55
2
0
42
1.11
42203--42426
94
2.4
93
79
12
244
36
10
7
45
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42908--42950
23
1.9
23
85
4
61
48
0
2
48
1.14
47028--47092
29
2.2
28
82
12
78
32
0
1
66
1.01
48949--49028
38
2.1
39
80
4
90
37
2
3
56
1.31
48954--49012
29
2.0
29
87
6
84
38
1
5
54
1.33
49281--49311
3
10.3
3
92
0
53
35
0
29
35
1.58
49812--49863
24
2.2
24
82
0
59
38
5
9
46
1.61
54332--54388
19
2.9
20
76
10
55
36
3
1
57
1.26
65100--65135
6
5.8
6
93
6
63
66
0
0
33
0.92
65103--65148
12
3.6
13
88
8
60
60
2
2
34
1.21
66338--66408
26
2.7
26
84
4
88
39
22
18
19
1.92
69717--69785
26
2.6
26
79
9
77
30
18
23
27
1.98
70787--70811
2
12.5
2
100
0
50
0
0
48
52
1.00
73990--74060
30
2.3
30
85
4
88
45
0
1
53
1.09
76243--76280
14
2.8
13
92
4
58
34
18
5
42
1.73
76247--76280
13
2.5
14
90
4
52
29
20
5
44
1.75
77031--77100
28
2.5
29
86
6
99
32
10
24
32
1.88
77401--77440
19
2.1
19
90
4
62
62
0
0
37
0.95
78937--79062
23
5.4
22
77
12
103
39
22
26
11
1.87

Tables:   1

The End!