Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011978.1 Kokia drynarioides strain JFW-HI SEQ_126976, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  107681

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4187--4239
27
1.9
28
85
11
74
50
9
11
28
1.69
4216--4294
31
2.6
31
78
11
92
60
8
5
25
1.47
8727--8762
17
2.1
17
90
10
56
30
0
0
69
0.89
9854--9914
19
3.0
21
71
11
54
49
4
1
44
1.33
13556--13697
74
1.9
74
92
1
241
36
7
2
54
1.40
13932--13981
20
2.5
21
78
18
61
54
2
0
44
1.11
13974--14017
20
2.3
19
84
4
52
68
4
6
20
1.31
23814--23943
63
2.1
63
86
2
181
36
8
25
29
1.85
31298--31355
28
2.1
28
93
0
98
20
18
27
32
1.97
41283--41322
21
2.0
20
85
14
55
47
0
0
52
1.00
41858--41898
17
2.3
18
80
15
50
24
4
0
70
1.06
43353--43431
31
2.6
31
84
9
92
41
2
6
49
1.42
46088--46172
42
2.0
42
93
4
145
44
11
1
42
1.48
61654--61747
49
1.9
48
82
6
118
65
8
1
24
1.27
61903--61975
12
6.1
12
83
0
92
68
17
6
6
1.35
61881--62007
24
5.2
24
83
6
121
68
17
7
6
1.35
61977--62009
17
1.9
17
93
0
57
72
18
6
3
1.18
61986--62022
19
1.9
19
94
0
65
72
18
5
2
1.15
64474--64512
19
2.1
19
85
9
53
2
2
12
82
0.89
70488--70518
2
15.5
2
100
0
62
48
51
0
0
1.00
71861--72003
57
2.5
57
97
0
268
32
15
29
23
1.95
71996--72288
93
3.2
92
93
4
484
31
13
34
20
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72596--72723
30
4.3
30
90
0
184
21
7
52
17
1.70
72597--72676
15
5.3
15
67
16
58
18
7
55
18
1.66
72826--73082
120
2.1
121
88
2
372
27
15
38
18
1.91
75667--75700
15
2.3
15
90
10
52
61
0
0
38
0.96
75850--75879
15
1.9
16
93
6
53
66
10
3
20
1.35
77604--77640
18
2.1
18
100
0
74
32
10
16
40
1.83
78984--79029
24
2.0
23
83
12
58
41
10
0
47
1.38
80251--80279
5
5.8
5
100
0
58
58
0
0
41
0.98
101099--101145
18
2.6
18
82
0
58
31
23
27
17
1.96
104116--104145
5
5.8
5
96
4
51
83
0
16
0
0.65

Tables:   1

The End!