Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011984.1 Kokia drynarioides strain JFW-HI SEQ_126982, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  103040

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
555--610
29
2.0
28
83
13
71
23
3
8
64
1.38
3176--3222
25
1.9
24
83
12
60
72
14
0
12
1.13
3480--3535
27
2.1
26
83
3
67
37
14
7
41
1.73
8403--8429
3
9.0
3
100
0
54
66
0
33
0
0.92
8634--8658
6
4.2
6
100
0
50
84
0
0
16
0.63
11465--11507
9
4.7
9
88
11
61
37
0
0
62
0.95
11473--11502
10
3.1
10
95
4
53
40
0
0
60
0.97
20764--20805
21
2.0
20
86
4
57
19
4
2
73
1.12
34441--34531
6
15.5
6
67
17
57
37
2
3
57
1.28
34441--34531
17
5.2
17
80
10
94
37
2
3
57
1.28
34441--34522
37
2.3
35
87
8
112
36
2
3
57
1.30
35226--35332
33
3.2
33
77
5
92
53
6
2
37
1.42
35283--35322
15
2.7
15
84
11
55
55
10
5
30
1.54
35224--35332
12
8.8
12
70
6
56
53
6
2
37
1.41
36376--36866
59
8.3
58
85
3
606
36
29
3
30
1.73
36376--36986
177
3.5
177
83
3
725
34
29
4
31
1.78
36920--36981
28
2.1
30
82
8
74
29
22
4
43
1.74
48668--48877
86
2.4
86
87
0
285
34
16
25
23
1.95
49740--49773
13
2.6
13
90
0
50
61
14
5
17
1.52
50420--50459
15
2.7
15
84
11
55
55
10
5
30
1.54
50388--50469
12
6.8
12
72
0
56
52
7
2
37
1.43
51533--51671
29
4.7
30
73
16
137
35
30
2
31
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51547--51658
30
3.8
29
76
14
113
33
32
3
30
1.75
51533--51671
59
2.3
59
92
1
224
35
30
2
31
1.72
51725--51785
28
2.1
30
84
9
81
29
24
4
40
1.76
65580--65633
11
5.1
10
77
6
54
75
3
1
18
1.03
65580--65633
22
2.5
20
82
11
63
75
3
1
18
1.03
70428--70459
2
15.5
2
93
6
55
50
3
0
46
1.17
70442--70482
21
1.9
22
85
5
57
51
7
0
41
1.30
70434--70505
26
2.6
26
80
12
65
50
5
2
41
1.40
73172--73227
15
3.5
15
74
11
58
69
3
1
25
1.14
79664--79702
19
2.1
19
85
9
53
0
12
7
79
0.93
89315--89441
23
5.4
23
78
5
121
11
22
22
44
1.84
89478--89516
18
2.2
18
100
0
78
20
25
17
35
1.95
90437--90461
3
8.3
3
100
0
50
32
0
36
32
1.58
91397--91442
15
3.0
16
76
17
53
19
13
10
56
1.66
92078--92121
21
2.2
20
83
4
52
63
2
4
29
1.26
94283--94354
30
2.4
31
79
6
85
48
0
1
50
1.09
95838--95880
19
2.3
19
79
0
50
62
2
0
34
1.08

Tables:   1

The End!