Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012008.1 Kokia drynarioides strain JFW-HI SEQ_127006, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87532

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3325--3370
25
1.9
23
86
8
65
36
4
4
54
1.40
10001--10043
23
2.0
21
90
9
68
39
13
4
41
1.66
13483--13587
30
3.3
30
70
17
104
39
14
22
23
1.91
13480--13608
65
2.0
65
93
4
224
41
13
20
23
1.88
13784--13826
21
2.0
21
86
0
59
46
2
2
48
1.27
14376--14434
30
2.0
30
83
6
77
40
6
10
42
1.65
14587--14636
6
8.3
6
84
8
66
48
2
2
48
1.24
14589--14635
23
2.0
24
87
4
69
48
2
2
46
1.25
17525--17605
27
2.9
28
82
10
94
62
2
1
33
1.16
17998--18036
20
1.9
20
89
5
60
61
2
0
35
1.10
18415--18466
15
3.6
14
80
17
61
34
0
5
59
1.21
23349--23381
2
16.5
2
100
0
66
48
0
51
0
1.00
24335--24359
2
12.5
2
100
0
50
52
0
48
0
1.00
25342--25385
21
2.1
21
83
8
54
63
6
13
15
1.49
28920--29228
141
2.2
146
80
9
359
40
0
36
22
1.59
29175--29224
16
3.2
16
69
8
50
36
0
40
24
1.55
32633--32681
24
2.0
26
84
8
66
53
0
0
46
1.00
37106--37198
45
2.1
45
97
0
177
36
11
17
34
1.86
46928--46974
14
3.3
14
80
13
51
38
0
0
61
0.96
52706--52740
16
2.1
17
89
10
54
54
0
2
42
1.15
55811--55840
14
2.1
14
93
0
51
30
0
20
50
1.49
55823--55880
21
2.7
22
79
17
68
31
0
22
46
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55842--55880
20
1.9
21
94
5
71
33
0
23
43
1.54
59083--59211
62
2.1
63
91
1
206
48
9
8
33
1.65
59280--59321
19
2.2
19
95
0
75
35
4
26
33
1.77
59314--59359
23
2.0
23
87
8
67
43
0
28
28
1.55
62152--62186
18
2.0
18
88
5
54
34
2
14
48
1.58
71130--71414
97
3.0
94
88
7
434
23
17
22
36
1.95
72212--72241
12
2.4
12
94
5
51
23
23
20
33
1.97
72769--72840
36
2.0
36
84
13
94
40
6
5
47
1.54
76932--76988
22
2.4
24
83
16
75
45
0
1
52
1.11
83660--83767
57
1.9
57
98
0
207
26
14
10
48
1.76
84431--84865
223
2.0
223
92
0
719
31
15
20
32
1.94

Tables:   1

The End!