Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012009.1 Kokia drynarioides strain JFW-HI SEQ_127007, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99125

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
775--860
12
7.2
12
75
17
56
30
3
1
65
1.17
774--889
30
3.9
30
90
1
173
28
5
2
63
1.29
846--879
18
1.9
17
88
5
50
26
5
2
64
1.30
775--889
59
1.9
59
89
3
178
28
5
1
64
1.25
1739--1918
54
3.0
61
80
10
171
36
16
13
33
1.88
1836--1998
82
2.0
84
87
4
242
31
19
20
28
1.97
1931--2126
55
3.6
56
78
6
213
36
18
12
32
1.88
8873--8949
22
3.5
22
87
3
109
15
1
38
44
1.55
9032--9431
80
5.0
80
84
2
489
33
11
15
39
1.83
19702--19789
29
3.1
29
86
4
117
23
21
20
34
1.97
19710--19789
28
2.8
29
86
1
117
23
20
21
35
1.96
21701--21741
15
2.9
15
75
24
52
36
17
7
39
1.77
22065--22356
83
3.6
82
76
7
261
44
12
11
31
1.77
25426--25520
45
2.1
45
81
11
106
29
17
8
44
1.78
29404--29512
45
2.4
45
85
0
146
33
22
22
22
1.98
30458--30491
17
2.0
17
88
11
52
47
8
26
17
1.77
32300--32359
30
2.0
30
96
0
111
18
10
25
46
1.79
32989--33026
19
2.0
19
85
10
51
13
7
57
21
1.60
35528--35567
21
2.0
21
90
5
64
30
15
10
45
1.78
35892--35917
11
2.4
11
100
0
52
23
11
15
50
1.76
48882--49121
23
10.4
23
85
2
295
33
4
12
49
1.61
48882--49121
69
3.5
69
88
2
331
33
4
12
49
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49201--49300
36
2.8
36
87
0
137
27
14
26
33
1.94
49978--52390
927
2.6
927
95
0
4299
29
10
21
38
1.87
54419--54539
23
5.3
23
80
0
143
36
4
13
45
1.65
54419--54771
46
7.8
46
81
5
398
33
4
14
47
1.64
54419--54771
69
5.2
69
79
5
416
33
4
14
47
1.64
54464--54623
84
1.9
84
83
5
207
35
6
11
46
1.68
54548--54771
23
9.7
23
86
0
295
33
4
14
47
1.65
61867--61946
40
2.0
40
97
0
151
51
11
20
17
1.75
64469--64504
18
1.9
19
88
5
56
33
0
19
47
1.50
67847--68322
46
10.3
46
81
8
403
34
5
14
46
1.66
67847--67907
23
2.7
23
81
0
86
31
6
14
47
1.70
67874--67941
34
2.0
34
88
0
100
30
5
16
47
1.70
67908--67969
23
2.7
23
89
0
88
37
6
9
46
1.62
67914--67976
23
2.7
22
78
9
63
39
4
9
46
1.58
67950--68024
38
2.0
38
89
0
114
34
5
14
45
1.68
67988--68322
23
14.6
23
86
1
438
34
4
14
46
1.66
67927--68047
61
2.0
61
80
0
134
35
5
13
45
1.67
70414--70491
38
2.1
38
97
0
147
34
21
8
34
1.85
70805--70846
21
2.0
22
85
4
59
11
19
4
64
1.44
77900--77965
25
2.5
27
80
9
82
25
24
24
25
2.00

Tables:   1

The End!