Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012039.1 Kokia drynarioides strain JFW-HI SEQ_127037, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51139

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105--150
4
11.2
4
84
13
58
0
28
0
71
0.86
105--149
13
3.6
13
88
8
67
0
26
0
73
0.84
5238--5284
21
2.2
21
81
7
60
38
0
6
55
1.26
7912--7959
24
2.0
24
91
0
78
54
0
4
41
1.20
9662--9708
20
2.3
20
85
7
60
59
4
2
34
1.29
17609--17636
2
14.0
2
100
0
56
50
0
0
50
1.00
21155--22103
219
4.4
217
78
12
831
32
22
13
30
1.93
21155--22112
215
4.4
211
79
11
923
32
22
13
31
1.93
21155--22112
426
2.2
427
80
9
1056
32
22
13
31
1.93
24424--24544
10
12.6
9
72
16
57
62
3
1
32
1.21
24424--24544
20
6.3
19
73
22
85
62
3
1
32
1.21
24498--24554
21
2.8
20
73
7
51
68
3
1
26
1.15
33508--33608
51
2.0
51
88
0
148
35
21
8
33
1.85
43120--43157
4
9.5
4
91
0
58
0
28
2
68
1.03
44684--44717
7
5.0
7
92
7
52
8
0
44
47
1.34
44684--44717
13
2.5
14
90
4
52
8
0
44
47
1.34
44726--44766
21
2.0
21
85
9
57
31
4
19
43
1.72
48999--49036
17
2.2
17
90
0
58
52
0
28
18
1.45
50198--50310
23
5.0
23
85
4
108
38
26
23
11
1.88
50741--50771
10
2.9
11
90
9
55
19
9
6
64
1.45

Tables:   1

The End!