Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012042.1 Kokia drynarioides strain JFW-HI SEQ_127040, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63690

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20968--21219
43
5.8
43
87
3
333
33
9
22
34
1.86
20968--21219
89
2.9
87
87
4
355
33
9
22
34
1.86
21582--21610
2
14.5
2
100
0
58
51
0
0
48
1.00
26165--26208
22
2.0
22
100
0
88
36
22
18
22
1.95
26800--26868
36
1.9
36
85
5
95
17
14
30
37
1.90
26798--26954
85
1.8
85
82
8
203
19
17
30
33
1.94
34000--34204
60
3.4
58
79
4
212
35
2
25
36
1.69
33993--34205
90
2.4
90
81
5
236
35
2
25
36
1.69
34000--34242
30
8.1
30
77
8
192
35
3
25
35
1.72
34152--34234
29
2.8
30
88
1
123
40
3
20
34
1.70
35901--36023
39
3.2
37
73
10
111
25
18
26
30
1.98
35940--36071
40
3.3
40
77
8
153
26
17
25
31
1.97
35899--36083
40
4.7
39
72
11
137
26
18
23
31
1.98
35861--36083
78
2.8
79
87
2
304
27
17
21
32
1.96
36101--36695
99
6.0
99
81
4
520
18
30
15
35
1.93
36175--36859
50
13.8
50
73
5
174
18
29
15
35
1.92
36100--36866
149
5.2
149
77
4
627
18
29
16
34
1.93
36119--36903
198
4.0
198
78
5
663
18
29
16
35
1.93
36619--36900
100
2.8
98
84
3
366
19
30
16
34
1.94
42425--42464
6
7.0
6
86
11
57
52
2
0
45
1.14
44407--44472
27
2.4
27
79
2
69
40
21
19
18
1.91
44502--44685
27
6.5
28
73
11
108
30
17
20
31
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50150--50192
6
7.2
6
83
0
50
11
46
2
39
1.53
50151--50192
18
2.3
18
87
0
66
9
47
2
40
1.49
50151--50192
12
3.5
12
83
0
57
9
47
2
40
1.49
61227--61267
16
2.5
17
88
11
68
43
7
0
48
1.30
61525--61568
23
2.0
23
86
4
63
43
2
0
54
1.12
62341--62387
22
2.1
23
84
11
62
57
6
4
31
1.43

Tables:   1

The End!