Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012045.1 Kokia drynarioides strain JFW-HI SEQ_127043, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46137

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
559--637
6
13.8
6
69
24
55
53
2
0
44
1.14
561--637
17
4.5
17
85
4
102
54
2
0
42
1.14
1014--1302
159
1.8
158
90
2
463
21
21
21
35
1.96
1122--1645
207
2.5
207
95
0
931
20
22
20
36
1.95
2104--2160
29
2.0
29
96
0
105
63
10
15
10
1.52
13380--13767
30
13.2
29
75
7
345
30
3
31
34
1.73
13393--13790
59
6.7
59
86
3
518
30
3
30
35
1.75
15618--15703
17
5.1
17
87
6
115
53
4
0
41
1.21
15616--15694
6
13.8
6
69
24
55
53
3
0
43
1.19
18044--18323
29
9.5
28
80
9
249
40
25
0
34
1.61
18044--18323
59
4.8
56
78
10
249
40
25
0
34
1.61
21139--21805
337
2.0
333
88
2
996
30
11
22
35
1.90
27268--29154
790
2.4
783
80
7
2101
36
12
16
34
1.85
32789--32830
20
2.0
21
86
4
59
66
0
4
28
1.12
34768--34807
21
1.9
21
89
0
62
60
7
0
32
1.25
34489--35096
305
2.0
306
90
2
972
37
11
16
35
1.84
35075--35118
19
2.3
19
85
14
63
59
6
4
29
1.44
35076--35119
21
2.2
19
88
8
61
61
6
4
27
1.41
38751--39613
438
2.0
435
88
3
1284
39
11
12
35
1.80
40682--40869
92
2.0
92
83
7
236
36
12
11
38
1.80
42535--42800
132
2.0
132
97
1
498
36
8
8
46
1.65
44562--45364
336
2.4
335
91
1
1279
29
13
21
35
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45432--45495
6
11.2
6
73
15
55
43
1
4
50
1.32
45432--45527
17
5.5
18
77
12
94
42
3
4
50
1.37
45400--45496
34
2.8
34
83
7
99
41
1
7
50
1.37

Tables:   1

The End!