Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012048.1 Kokia drynarioides strain JFW-HI SEQ_127046, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37350

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1233--1282
13
3.6
14
83
8
57
74
6
4
16
1.17
4880--4913
2
17.0
2
100
0
68
0
50
0
50
1.00
4913--4939
2
13.5
2
100
0
54
48
0
0
51
1.00
5255--5577
158
2.0
158
83
2
398
29
21
24
23
1.99
8818--8843
13
2.0
13
100
0
52
69
7
7
15
1.35
9945--10055
40
2.9
36
72
23
102
69
2
4
23
1.20
10064--10108
13
3.3
13
84
6
54
75
6
2
15
1.11
11750--11814
32
2.0
32
100
0
130
36
9
6
47
1.60
13223--13561
49
6.9
49
74
8
244
18
24
17
39
1.92
13233--13551
98
3.3
98
85
5
378
19
25
15
40
1.90
13570--14028
49
9.4
49
69
7
168
19
21
16
42
1.89
13699--13937
97
2.5
97
80
4
250
21
23
14
40
1.90
13278--13865
325
1.8
327
81
3
738
19
23
15
40
1.91
13698--14028
97
3.4
96
76
8
249
20
21
15
41
1.89
21354--21396
15
3.0
15
90
10
72
62
11
11
13
1.54
22627--22767
16
8.8
16
63
12
56
69
6
5
18
1.30
22625--22801
98
1.8
98
89
7
279
67
6
5
20
1.35
22752--22799
24
1.9
25
84
16
64
64
10
2
22
1.35
23993--24034
14
2.7
15
85
10
50
33
4
0
61
1.17
32050--32092
10
4.1
10
85
11
59
83
0
13
2
0.74
32050--32091
16
2.6
17
81
11
52
83
0
14
2
0.75
32954--33645
49
14.1
48
79
4
488
36
14
26
22
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32949--33654
98
7.2
98
79
2
585
36
14
26
22
1.92
32954--33647
147
4.7
147
79
3
610
36
14
25
22
1.93

Tables:   1

The End!