Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012054.1 Kokia drynarioides strain JFW-HI SEQ_127052, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37829

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
607--643
19
1.9
19
89
10
58
16
45
27
10
1.80
1222--1607
29
13.1
30
70
14
175
36
29
3
30
1.73
1208--1607
30
13.6
28
68
11
149
36
29
3
30
1.73
1302--1525
59
3.8
56
83
8
187
37
30
1
29
1.68
1302--1526
118
1.9
118
80
5
267
37
30
1
30
1.68
1446--1608
87
1.9
88
87
3
240
33
29
4
32
1.77
6215--7022
199
4.1
199
92
1
1325
36
17
25
20
1.95
7333--7425
17
5.4
17
84
2
114
40
2
3
53
1.29
7348--7425
6
13.5
6
72
12
65
42
2
2
52
1.28
7362--7411
23
2.2
23
85
7
66
40
0
4
56
1.18
9472--9564
17
5.4
17
84
2
114
40
2
3
53
1.29
9487--9564
6
13.5
6
72
12
65
42
2
2
52
1.28
9501--9550
23
2.2
23
85
7
66
40
0
4
56
1.18
11479--11798
59
5.4
58
75
11
197
36
29
4
30
1.76
11493--11595
30
3.4
29
67
17
75
35
26
5
32
1.80
11522--11878
29
12.2
27
69
15
178
35
30
3
29
1.76
11601--11879
30
9.5
30
68
12
141
36
30
3
29
1.75
11564--11878
88
3.6
85
76
10
287
35
30
3
30
1.75
11660--11763
31
3.5
31
70
12
99
35
25
3
34
1.75
11573--11785
59
3.6
59
81
6
234
36
30
3
29
1.74
11788--11907
58
2.1
58
84
3
152
32
30
4
32
1.77
16502--16579
40
2.0
40
84
0
102
24
3
5
66
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16689--16719
12
2.6
12
89
0
53
41
0
0
58
0.98
19338--19388
25
2.0
26
88
7
77
52
5
1
39
1.37
19506--19540
18
2.0
17
88
5
52
60
5
5
28
1.43
32169--32250
41
2.0
41
92
4
139
34
1
9
54
1.41

Tables:   1

The End!