Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012077.1 Kokia drynarioides strain JFW-HI SEQ_127075, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98252

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
316--461
27
4.9
29
67
20
88
46
11
18
23
1.81
316--461
58
2.5
60
92
3
244
46
11
18
23
1.81
368--473
31
3.5
31
71
17
107
45
10
18
25
1.81
1397--1507
54
2.1
54
98
0
213
29
19
14
36
1.92
10825--10860
18
2.0
18
89
10
56
38
0
8
52
1.32
15750--15779
14
2.1
14
93
0
51
56
0
0
43
0.99
15783--15835
25
2.2
25
89
3
81
41
0
5
52
1.25
31293--31348
29
2.0
26
83
10
67
57
5
1
35
1.32
32270--32328
31
1.9
31
86
6
84
27
1
5
66
1.22
36114--36149
17
2.1
17
94
0
63
63
0
8
27
1.23
36125--36158
17
2.0
17
88
0
50
64
2
8
23
1.36
45978--46060
32
2.6
30
76
10
76
59
0
1
39
1.05
46254--46285
17
1.9
17
93
6
57
50
15
6
28
1.68
48624--48667
21
2.2
20
83
4
52
34
4
2
59
1.30
50450--50502
24
2.2
24
86
6
72
26
16
9
47
1.77
50450--50495
23
2.0
24
86
4
67
21
19
8
50
1.75
50587--50634
21
2.3
21
78
7
53
39
8
8
43
1.65
56564--56658
43
2.2
43
92
0
154
26
14
21
37
1.92
57293--57366
29
2.5
30
82
4
87
50
12
4
33
1.59
64356--64528
87
2.0
90
84
7
230
30
16
9
42
1.81
69243--69308
31
2.1
31
85
0
87
53
12
16
18
1.73
69729--69757
14
2.0
15
93
6
51
72
0
0
27
0.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85438--85472
17
2.1
17
88
0
52
51
0
2
45
1.16
88223--88286
32
2.0
32
100
0
128
31
28
12
28
1.93
88327--88402
37
2.0
38
89
2
118
28
39
17
14
1.89
89915--89960
22
2.1
21
84
4
56
45
0
0
54
0.99
91020--91089
4
17.2
4
79
8
52
62
0
37
0
0.95
91021--91045
13
1.9
13
100
0
50
76
0
24
0
0.80
91019--91090
29
2.5
31
78
15
82
61
0
38
0
0.96
94133--94204
28
2.6
28
79
18
80
26
11
19
43
1.84
94145--94215
28
2.6
27
82
14
83
23
8
21
46
1.78
94482--94618
45
3.0
45
85
6
188
19
20
26
33
1.97
96547--96596
16
3.2
16
73
21
52
34
0
6
60
1.21
97463--97517
21
2.5
21
78
21
60
3
23
0
72
1.00

Tables:   1

The End!