Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012090.1 Kokia drynarioides strain JFW-HI SEQ_127089, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43425

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
232--318
17
5.1
17
81
2
111
36
2
3
57
1.28
227--326
6
16.8
6
71
9
62
39
2
3
56
1.26
232--314
35
2.4
34
89
2
121
37
2
3
56
1.30
1725--2092
30
12.5
30
77
9
249
35
25
2
35
1.71
1734--2039
59
5.2
58
79
9
246
34
26
3
35
1.73
3297--3797
170
3.0
170
91
0
801
31
15
22
30
1.95
3851--3890
17
2.3
17
86
4
53
67
7
5
20
1.34
3882--3910
11
2.5
12
94
5
51
62
0
0
37
0.96
3865--3957
27
3.3
29
78
4
84
63
1
3
32
1.17
3911--3962
15
3.7
15
78
19
51
61
0
7
30
1.24
3978--4056
23
3.5
21
79
16
70
54
2
1
41
1.22
3993--4066
23
3.2
23
92
3
114
51
4
1
43
1.29
4147--4185
20
1.9
21
94
5
71
20
2
20
56
1.54
4295--4370
40
1.9
40
86
0
107
27
21
28
22
1.99
5159--5243
40
2.1
40
100
0
170
42
28
4
24
1.75
6871--6926
28
2.0
28
86
3
78
57
1
5
35
1.32
7234--7270
17
2.2
17
90
0
56
51
0
29
18
1.47
7243--7290
24
2.0
24
84
8
62
45
2
33
18
1.61
17590--17726
72
1.9
72
89
0
211
38
11
13
36
1.81
24787--24819
16
2.1
16
88
5
50
45
0
33
21
1.52
38096--38125
13
2.3
13
100
0
60
20
6
40
33
1.78
38441--38465
5
5.0
5
100
0
50
20
0
0
80
0.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41416--41463
21
2.3
22
79
17
57
22
2
2
72
1.05

Tables:   1

The End!