Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012091.1 Kokia drynarioides strain JFW-HI SEQ_127090, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  138870

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
118--224
27
4.0
27
93
0
187
13
30
31
24
1.93
2432--2495
32
2.0
32
93
0
110
25
9
12
53
1.68
2856--2967
49
2.3
46
76
14
109
33
2
8
54
1.46
2870--2969
50
2.0
50
84
5
132
34
3
10
53
1.50
2894--2992
50
2.0
50
82
4
119
36
3
9
51
1.49
5042--5289
122
2.0
121
97
1
471
34
12
20
32
1.90
5702--5727
9
2.9
9
100
0
52
0
7
0
92
0.39
12258--12350
46
2.0
46
100
0
186
24
2
23
49
1.61
28219--28278
25
2.3
25
85
5
75
16
13
10
60
1.59
28232--28286
25
2.2
25
83
3
65
18
7
14
60
1.57
30246--30340
44
2.2
44
96
0
172
35
12
10
41
1.78
36608--36771
28
6.0
27
75
6
123
33
28
13
24
1.93
36627--36761
14
9.8
14
68
15
57
33
27
13
25
1.93
36723--36761
13
2.9
14
84
7
53
30
28
15
25
1.96
36575--36793
83
2.6
82
80
9
271
29
29
16
24
1.96
36754--36818
29
2.2
28
81
7
76
26
33
16
23
1.96
36803--37316
252
2.0
251
96
0
956
28
13
17
40
1.87
37483--37601
15
8.0
15
72
12
75
24
26
24
24
2.00
37483--37609
30
4.3
30
77
4
114
25
27
23
23
2.00
39270--39315
25
1.9
25
86
8
69
34
4
6
54
1.46
41068--41106
11
3.5
11
85
0
60
23
17
15
43
1.87
43790--43830
20
2.0
20
90
0
64
56
4
0
39
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43840--43893
11
4.8
11
81
4
63
61
1
1
35
1.18
48730--48759
3
10.0
3
92
0
51
30
0
3
66
1.07
48758--48789
3
10.7
3
100
0
64
0
0
31
68
0.90
66655--66707
25
2.1
25
100
0
106
22
26
7
43
1.80
73200--73244
19
2.4
19
81
7
56
37
0
4
57
1.19
74049--74088
21
1.9
21
94
0
71
12
10
2
75
1.15
79400--79602
100
2.0
100
100
0
406
41
19
18
20
1.91
83355--83409
18
3.1
19
84
10
71
29
14
30
25
1.95
83369--83409
12
3.4
12
79
0
55
29
14
31
24
1.95
84910--85034
60
2.1
61
92
1
207
28
8
13
49
1.70
85869--85903
12
2.8
13
83
16
56
60
0
0
40
0.97
102768--102812
22
2.0
23
83
12
58
53
6
0
40
1.27
102915--102955
21
2.0
21
95
0
73
51
0
0
48
1.00
105560--105603
3
14.7
3
100
0
88
0
31
0
68
0.90
119625--119677
9
6.8
9
71
28
50
50
0
0
49
1.00
119621--119677
20
3.0
20
74
23
59
52
0
0
47
1.00
119630--119702
29
2.4
31
93
4
123
52
0
1
46
1.09
119630--119709
30
2.7
29
83
9
99
50
0
1
48
1.08
131428--131458
2
15.5
2
100
0
62
48
0
0
51
1.00
132067--132116
21
2.4
21
82
0
64
32
22
12
34
1.90
132276--132315
21
1.9
21
94
0
71
32
20
20
27
1.97

Tables:   1

The End!