Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012098.1 Kokia drynarioides strain JFW-HI SEQ_127097, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57337

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1001--1144
23
6.2
22
78
12
128
14
22
19
43
1.87
3219--3261
21
2.0
23
86
9
63
25
16
6
51
1.69
3998--4042
22
2.0
22
91
8
74
17
17
26
37
1.93
8675--8882
89
2.3
87
84
7
258
37
18
9
34
1.82
9000--9047
19
2.5
19
68
0
51
62
0
4
33
1.14
9264--9383
10
12.9
9
71
19
61
33
3
1
61
1.22
9204--9326
46
2.7
46
81
11
144
31
5
3
59
1.37
9336--9364
2
14.5
2
100
0
58
48
0
0
51
1.00
9194--9383
84
2.3
84
80
9
203
33
4
2
59
1.31
13987--14021
6
6.0
6
93
3
54
51
0
31
17
1.45
15353--15392
12
3.3
12
82
0
53
65
10
0
25
1.24
17172--17198
4
6.8
4
100
0
54
77
0
22
0
0.76
19016--19079
28
2.2
29
83
5
76
31
7
3
57
1.43
22673--22736
34
1.9
34
90
3
103
43
6
3
46
1.44
33884--33967
42
2.0
42
86
4
116
34
0
17
47
1.48
36949--37000
14
3.4
14
76
12
50
40
3
0
55
1.18
37191--37242
19
2.9
18
80
5
61
46
5
0
48
1.26
40535--41253
234
3.0
234
83
4
859
33
10
19
36
1.86
42653--42893
96
2.5
96
83
2
288
28
34
14
21
1.94
46582--46641
31
2.0
31
90
3
95
50
10
5
35
1.58
49088--49209
63
2.0
63
81
4
149
21
14
22
41
1.89
50437--50492
16
3.6
16
87
2
78
10
71
7
10
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51079--51168
32
2.8
32
81
9
103
13
5
44
36
1.67
51525--51566
17
2.5
18
81
11
54
33
0
2
64
1.07
53950--53984
12
2.9
12
86
0
52
42
0
34
22
1.54
54113--54191
37
2.1
38
80
2
88
22
17
26
32
1.96
55806--55846
12
3.4
12
89
0
64
58
0
34
7
1.26
55806--55846
3
13.7
3
84
0
55
58
0
34
7
1.26
55898--55938
14
2.7
16
77
14
50
43
0
0
56
0.99

Tables:   1

The End!