Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NTFQ01012100.1 Kokia drynarioides strain JFW-HI SEQ_127099, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 59065
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.34
Warning! 2 characters in sequence are not A, C, G, or T
Found at i:266 original size:23 final size:23
Alignment explanation
Indices: 240--286 Score: 85
Period size: 23 Copynumber: 2.0 Consensus size: 23
230 TCCAATCAAA
240 AGCTTCTAGAAGGTCCAGTCAGC
1 AGCTTCTAGAAGGTCCAGTCAGC
*
263 AGCTTCTAGAAGGTCTAGTCAGC
1 AGCTTCTAGAAGGTCCAGTCAGC
286 A
1 A
287 AGGATGGACG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
23 23 1.00
ACGTcount: A:0.28, C:0.23, G:0.26, T:0.23
Consensus pattern (23 bp):
AGCTTCTAGAAGGTCCAGTCAGC
Found at i:368 original size:22 final size:23
Alignment explanation
Indices: 343--395 Score: 54
Period size: 23 Copynumber: 2.3 Consensus size: 23
333 TTATCTTTTG
*
343 TTTTTAGGATTTA-ATTTAAATA
1 TTTTTAGGAATTATATTTAAATA
* * * *
365 TTTTCAAGAATTATATTTTATTA
1 TTTTTAGGAATTATATTTAAATA
388 TTTTTAGG
1 TTTTTAGG
396 TTATTTTTCG
Statistics
Matches: 23, Mismatches: 7, Indels: 1
0.74 0.23 0.03
Matches are distributed among these distances:
22 10 0.43
23 13 0.57
ACGTcount: A:0.32, C:0.02, G:0.09, T:0.57
Consensus pattern (23 bp):
TTTTTAGGAATTATATTTAAATA
Found at i:12196 original size:30 final size:29
Alignment explanation
Indices: 12121--12199 Score: 88
Period size: 29 Copynumber: 2.7 Consensus size: 29
12111 GGAAAGTTCA
* *
12121 GGAGTCAAATCAAAATTTTTAGAAAATTT
1 GGAGTCAAAACATAATTTTTAGAAAATTT
*
12150 GGGGTCAAAACATAATTTTTA-AAAAGTTT
1 GGAGTCAAAACATAATTTTTAGAAAA-TTT
* *
12179 GGAAGTCAGAGCATAATTTTT
1 GG-AGTCAAAACATAATTTTT
12200 GGACAGTTTG
Statistics
Matches: 42, Mismatches: 6, Indels: 3
0.82 0.12 0.06
Matches are distributed among these distances:
28 4 0.10
29 23 0.55
30 15 0.36
ACGTcount: A:0.41, C:0.08, G:0.18, T:0.34
Consensus pattern (29 bp):
GGAGTCAAAACATAATTTTTAGAAAATTT
Found at i:12385 original size:16 final size:16
Alignment explanation
Indices: 12364--12394 Score: 53
Period size: 16 Copynumber: 1.9 Consensus size: 16
12354 TGACATATTT
*
12364 AAATAACGTTCATTAC
1 AAATAACCTTCATTAC
12380 AAATAACCTTCATTA
1 AAATAACCTTCATTA
12395 TTAACAATGT
Statistics
Matches: 14, Mismatches: 1, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
16 14 1.00
ACGTcount: A:0.45, C:0.19, G:0.03, T:0.32
Consensus pattern (16 bp):
AAATAACCTTCATTAC
Found at i:25187 original size:38 final size:38
Alignment explanation
Indices: 25136--25223 Score: 158
Period size: 38 Copynumber: 2.3 Consensus size: 38
25126 TCCTTTGTTG
25136 TATAAATTGTGTAAGGTAAGTAATCTCTCTCAGTAACT
1 TATAAATTGTGTAAGGTAAGTAATCTCTCTCAGTAACT
25174 TATAAATTGTGTAAGGTAAGTAATCTCTCTCAGTAACT
1 TATAAATTGTGTAAGGTAAGTAATCTCTCTCAGTAACT
* *
25212 TATGAATGGTGT
1 TATAAATTGTGT
25224 TTGTATTAGT
Statistics
Matches: 48, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
38 48 1.00
ACGTcount: A:0.33, C:0.11, G:0.18, T:0.38
Consensus pattern (38 bp):
TATAAATTGTGTAAGGTAAGTAATCTCTCTCAGTAACT
Found at i:25833 original size:13 final size:13
Alignment explanation
Indices: 25815--25841 Score: 54
Period size: 13 Copynumber: 2.1 Consensus size: 13
25805 GAACTGTTAT
25815 TGTGAGCCTTTTG
1 TGTGAGCCTTTTG
25828 TGTGAGCCTTTTG
1 TGTGAGCCTTTTG
25841 T
1 T
25842 TAATTTATGT
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 14 1.00
ACGTcount: A:0.07, C:0.15, G:0.30, T:0.48
Consensus pattern (13 bp):
TGTGAGCCTTTTG
Found at i:26944 original size:14 final size:14
Alignment explanation
Indices: 26925--26968 Score: 54
Period size: 14 Copynumber: 3.2 Consensus size: 14
26915 TAGTATAAAT
26925 TATTATTTAATTAA
1 TATTATTTAATTAA
*
26939 TATTATTTTATT-A
1 TATTATTTAATTAA
* *
26952 TATTAATGAATTAA
1 TATTATTTAATTAA
26966 TAT
1 TAT
26969 ATATATATAA
Statistics
Matches: 25, Mismatches: 4, Indels: 2
0.81 0.13 0.06
Matches are distributed among these distances:
13 10 0.40
14 15 0.60
ACGTcount: A:0.41, C:0.00, G:0.02, T:0.57
Consensus pattern (14 bp):
TATTATTTAATTAA
Found at i:27107 original size:39 final size:38
Alignment explanation
Indices: 27051--27129 Score: 97
Period size: 39 Copynumber: 2.1 Consensus size: 38
27041 TAAATTAAAT
* * *
27051 ATTTATTTATTTATTATTTAAGTAA-ATAGATATTTATA
1 ATTTATTAATTTATTA-TTAACTAATATAGATATATATA
*
27089 ATTTATTAATATTATTATTAACTAATATATATATATATA
1 ATTTATTAAT-TTATTATTAACTAATATAGATATATATA
27128 AT
1 AT
27130 ATATAAAAGA
Statistics
Matches: 35, Mismatches: 4, Indels: 3
0.83 0.10 0.07
Matches are distributed among these distances:
38 16 0.46
39 19 0.54
ACGTcount: A:0.43, C:0.01, G:0.03, T:0.53
Consensus pattern (38 bp):
ATTTATTAATTTATTATTAACTAATATAGATATATATA
Found at i:27160 original size:9 final size:9
Alignment explanation
Indices: 27146--27170 Score: 50
Period size: 9 Copynumber: 2.8 Consensus size: 9
27136 AAGAATAAAG
27146 AAAAGAAAC
1 AAAAGAAAC
27155 AAAAGAAAC
1 AAAAGAAAC
27164 AAAAGAA
1 AAAAGAA
27171 GGAATAAAAC
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
9 16 1.00
ACGTcount: A:0.80, C:0.08, G:0.12, T:0.00
Consensus pattern (9 bp):
AAAAGAAAC
Found at i:27631 original size:17 final size:18
Alignment explanation
Indices: 27609--27644 Score: 56
Period size: 18 Copynumber: 2.1 Consensus size: 18
27599 TAAATGAGTT
27609 AATTAGGAT-TAAATTGG
1 AATTAGGATATAAATTGG
*
27626 AATTAGGGTATAAATTGG
1 AATTAGGATATAAATTGG
27644 A
1 A
27645 TAGAAATTCA
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
17 8 0.47
18 9 0.53
ACGTcount: A:0.42, C:0.00, G:0.25, T:0.33
Consensus pattern (18 bp):
AATTAGGATATAAATTGG
Found at i:27966 original size:18 final size:18
Alignment explanation
Indices: 27943--27979 Score: 56
Period size: 18 Copynumber: 2.1 Consensus size: 18
27933 TTTGTGATCA
27943 AAATTGAAAGTGAAAGTG
1 AAATTGAAAGTGAAAGTG
* *
27961 AAATTGGAATTGAAAGTG
1 AAATTGAAAGTGAAAGTG
27979 A
1 A
27980 TATGAATTGT
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
18 17 1.00
ACGTcount: A:0.49, C:0.00, G:0.27, T:0.24
Consensus pattern (18 bp):
AAATTGAAAGTGAAAGTG
Found at i:29607 original size:22 final size:23
Alignment explanation
Indices: 29582--29625 Score: 63
Period size: 22 Copynumber: 2.0 Consensus size: 23
29572 TAAATATGAT
*
29582 TTTTTAGGTGATA-TATTTTTTA
1 TTTTTAGGTGAAACTATTTTTTA
*
29604 TTTTTAGTTGAAACTATTTTTT
1 TTTTTAGGTGAAACTATTTTTT
29626 TTTATTTTAG
Statistics
Matches: 19, Mismatches: 2, Indels: 1
0.86 0.09 0.05
Matches are distributed among these distances:
22 11 0.58
23 8 0.42
ACGTcount: A:0.23, C:0.02, G:0.11, T:0.64
Consensus pattern (23 bp):
TTTTTAGGTGAAACTATTTTTTA
Found at i:47853 original size:37 final size:37
Alignment explanation
Indices: 47734--47861 Score: 106
Period size: 37 Copynumber: 3.5 Consensus size: 37
47724 TATCTCAACC
* * *
47734 TTTTT-AAGGTTGCTTTAGACAGGTCTATTCC-AATT
1 TTTTTAAAGATTGCTTTAGACAGGTTTATCCCAAATT
* * * *
47769 TTTTTAAAGGTTTAC-TTAGACAATGTTTACCCCAAA--
1 TTTTTAAA-GATTGCTTTAGAC-AGGTTTATCCCAAATT
*
47805 CTTTTAAAGATTGCTTTAGAC-GAGTTTATCCCAAATT
1 TTTTTAAAGATTGCTTTAGACAG-GTTTATCCCAAATT
*
47842 TTTTTAAAGATTGCCTTAGA
1 TTTTTAAAGATTGCTTTAGA
47862 TAAATTCTAT
Statistics
Matches: 72, Mismatches: 13, Indels: 14
0.73 0.13 0.14
Matches are distributed among these distances:
35 20 0.28
36 21 0.29
37 29 0.40
38 2 0.03
ACGTcount: A:0.29, C:0.15, G:0.14, T:0.42
Consensus pattern (37 bp):
TTTTTAAAGATTGCTTTAGACAGGTTTATCCCAAATT
Found at i:47947 original size:38 final size:38
Alignment explanation
Indices: 47876--48214 Score: 286
Period size: 38 Copynumber: 9.1 Consensus size: 38
47866 TTCTATCTCT
* * *
47876 AAGGTTGCCTTAGAT-GGGTCTATCCTAACCTTTTTTA
1 AAGGTTGCCTTAGATAAGATCTATCCCAACCTTTTTTA
* * *
47913 TAGGTTGCCTTAGGTAAGATCTATCCCAATC-TTTTT-
1 AAGGTTGCCTTAGATAAGATCTATCCCAACCTTTTTTA
** * * * * *
47949 AAGGTTATCTCAGATAAGGTCTATTCCAACCATTTTCA
1 AAGGTTGCCTTAGATAAGATCTATCCCAACCTTTTTTA
** * * *
47987 AAGGTTGTTTTAGACAAGTTTTATCCCAACC-TTTTT-
1 AAGGTTGCCTTAGATAAGATCTATCCCAACCTTTTTTA
* * * *
48023 AAGGTTGCCTTAGAT-GGTTTTATCCCAACCCTTTTTA
1 AAGGTTGCCTTAGATAAGATCTATCCCAACCTTTTTTA
* *
48060 AAGGTTACCTTAGATAA-AGTCTATCCCAACCATTTTTA
1 AAGGTTGCCTTAGATAAGA-TCTATCCCAACCTTTTTTA
* * *
48098 AAGGTTGCCTTAGACAATATCTATCTCAA-CTTTTTT-
1 AAGGTTGCCTTAGATAAGATCTATCCCAACCTTTTTTA
* * *
48134 AAGGTTGCCTTAG--ACGATTTTATCCCAACCATTTTTAA
1 AAGGTTGCCTTAGATAAGA-TCTATCCCAACC-TTTTTTA
* *
48172 AAGGTTGCCTTAGACAAGATCTATCCCAACCTTTTTTG
1 AAGGTTGCCTTAGATAAGATCTATCCCAACCTTTTTTA
48210 AAGGT
1 AAGGT
48215 CGGCCTTGAT
Statistics
Matches: 243, Mismatches: 45, Indels: 27
0.77 0.14 0.09
Matches are distributed among these distances:
34 2 0.01
35 22 0.09
36 54 0.22
37 51 0.21
38 99 0.41
39 12 0.05
40 3 0.01
ACGTcount: A:0.27, C:0.20, G:0.15, T:0.38
Consensus pattern (38 bp):
AAGGTTGCCTTAGATAAGATCTATCCCAACCTTTTTTA
Found at i:48075 original size:111 final size:111
Alignment explanation
Indices: 47894--48207 Score: 355
Period size: 111 Copynumber: 2.8 Consensus size: 111
47884 CTTAGATGGG
* * * * * * *
47894 TCTATCCTAACCTTTTTTATAGGTTGCCTTAGGTAAGATCTATCCCAA-TCTTTTT-AAGGTTAT
1 TCTATCCCAACC-TTTTTA-AGGTTGCCTTAGAT-GGTTTTATCCCAACCCTTTTTAAAGGTTAC
* * **
47957 CTCAGATAAGGTCTATTCCAACCATTTTCAAAGGTTGTTTTAGACAAGT-
63 CTTAGATAAGGTCTATCCCAACCATTTTCAAAGGTTGCCTTAGACAA-TA
*
48006 TTTATCCCAACCTTTTTAAGGTTGCCTTAGATGGTTTTATCCCAACCCTTTTTAAAGGTTACCTT
1 TCTATCCCAACCTTTTTAAGGTTGCCTTAGATGGTTTTATCCCAACCCTTTTTAAAGGTTACCTT
* *
48071 AGATAAAGTCTATCCCAACCATTTTTAAAGGTTGCCTTAGACAATA
66 AGATAAGGTCTATCCCAACCATTTTCAAAGGTTGCCTTAGACAATA
* * * * * *
48117 TCTATCTCAACTTTTTTAAGGTTGCCTTAGACGATTTTATCCCAACCATTTTTAAAAGGTTGCCT
1 TCTATCCCAACCTTTTTAAGGTTGCCTTAGATGGTTTTATCCCAACCCTTTTT-AAAGGTTACCT
* * *
48182 TAGACAAGATCTATCCCAACCTTTTT
65 TAGATAAGGTCTATCCCAACCATTTT
48208 TGAAGGTCGG
Statistics
Matches: 173, Mismatches: 25, Indels: 8
0.84 0.12 0.04
Matches are distributed among these distances:
109 10 0.06
110 20 0.12
111 101 0.58
112 42 0.24
ACGTcount: A:0.27, C:0.21, G:0.13, T:0.39
Consensus pattern (111 bp):
TCTATCCCAACCTTTTTAAGGTTGCCTTAGATGGTTTTATCCCAACCCTTTTTAAAGGTTACCTT
AGATAAGGTCTATCCCAACCATTTTCAAAGGTTGCCTTAGACAATA
Found at i:48145 original size:74 final size:74
Alignment explanation
Indices: 47894--48214 Score: 249
Period size: 74 Copynumber: 4.3 Consensus size: 74
47884 CTTAGATGGG
* * ** * **
47894 TCTATCCTAACCTTTTTTATAGGTTGCCTTAGGTAAGATCTATCCCAATC-TTTTT-AAGGTTAT
1 TCTATCCCAACCTTTTTTA-AGGTTACCTTAGAAAAG-TCTATCCCAACCATTTTTAAAGGTTGC
* * **
47957 CTCAGATAAGG
64 CTTAGACAATA
* ** *** * *
47968 TCTATTCCAACCATTTTCAAAGGTTGTTTTAGACAAGTTTTATCCCAACC-TTTTT-AAGGTTGC
1 TCTATCCCAACC-TTTTTTAAGGTTACCTTAGAAAAG-TCTATCCCAACCATTTTTAAAGGTTGC
***
48031 CTTAGATGGT-
64 CTTAGACAATA
* *
48041 TTTATCCCAACCCTTTTTAAAGGTTACCTTAGATAAAGTCTATCCCAACCATTTTTAAAGGTTGC
1 TCTATCCCAA-CCTTTTTTAAGGTTACCTTAGA-AAAGTCTATCCCAACCATTTTTAAAGGTTGC
48106 CTTAGACAATA
64 CTTAGACAATA
* * ** * *
48117 TCTATCTCAA-CTTTTTTAAGGTTGCCTTAGACGATTTTATCCCAACCATTTTTAAAAGGTTGCC
1 TCTATCCCAACCTTTTTTAAGGTTACCTTAGAAAAGTCTATCCCAACCATTTTT-AAAGGTTGCC
*
48181 TTAGACAAGA
65 TTAGACAATA
48191 TCTATCCCAACCTTTTTTGAAGGT
1 TCTATCCCAACCTTTTTT-AAGGT
48215 CGGCCTTGAT
Statistics
Matches: 200, Mismatches: 38, Indels: 16
0.79 0.15 0.06
Matches are distributed among these distances:
73 53 0.26
74 107 0.54
75 27 0.14
76 13 0.06
ACGTcount: A:0.27, C:0.21, G:0.13, T:0.39
Consensus pattern (74 bp):
TCTATCCCAACCTTTTTTAAGGTTACCTTAGAAAAGTCTATCCCAACCATTTTTAAAGGTTGCCT
TAGACAATA
Found at i:54096 original size:13 final size:13
Alignment explanation
Indices: 54078--54103 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
54068 CTAGCAATGC
54078 AGCAGCATGAAGA
1 AGCAGCATGAAGA
54091 AGCAGCATGAAGA
1 AGCAGCATGAAGA
54104 CATTTTGTAT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.46, C:0.15, G:0.31, T:0.08
Consensus pattern (13 bp):
AGCAGCATGAAGA
Found at i:58133 original size:37 final size:37
Alignment explanation
Indices: 58080--58215 Score: 148
Period size: 37 Copynumber: 3.7 Consensus size: 37
58070 ATATTCGGGT
* * *
58080 TATGTGCCTAACAGGCTTCGTGCCGGTGAA-TCTGAGT
1 TATGTGCCTAGCAGGCTTCGTGCCGGTGAATTCAGA-C
* *
58117 TGTGTGCCTAGTAGGCTTCGTGCCGGTGAATTCAGAC
1 TATGTGCCTAGCAGGCTTCGTGCCGGTGAATTCAGAC
** * *
58154 TATGTGCCTAGCAGGCTTCGTGCTAGTGAATTCGGGC
1 TATGTGCCTAGCAGGCTTCGTGCCGGTGAATTCAGAC
* * *
58191 TGTGTGCCTAGCAAGCTTCATGCCG
1 TATGTGCCTAGCAGGCTTCGTGCCG
58216 ATATATTCGG
Statistics
Matches: 82, Mismatches: 16, Indels: 2
0.82 0.16 0.02
Matches are distributed among these distances:
37 78 0.95
38 4 0.05
ACGTcount: A:0.17, C:0.23, G:0.31, T:0.29
Consensus pattern (37 bp):
TATGTGCCTAGCAGGCTTCGTGCCGGTGAATTCAGAC
Found at i:58201 original size:74 final size:74
Alignment explanation
Indices: 58080--58313 Score: 201
Period size: 74 Copynumber: 3.2 Consensus size: 74
58070 ATATTCGGGT
* * * * * *
58080 TATGTGCCTAACAGGCTTCGTGCCGGTGAA-TCTGAGTTGTGTGCCTAGTAGGCTTCGTGCCGGT
1 TATGTGCCTAGCAGGCTTCGTGCTGGTGAATTC-GGGCTGTGTGCCTAGTAGGCTTCATGCCGAT
58144 GA-ATTCAGAC
65 -ATATTCAGAC
* * *
58154 TATGTGCCTAGCAGGCTTCGTGCTAGTGAATTCGGGCTGTGTGCCTAGCAAGCTTCATGCCGATA
1 TATGTGCCTAGCAGGCTTCGTGCTGGTGAATTCGGGCTGTGTGCCTAGTAGGCTTCATGCCGATA
* *
58219 TATTCGGGC
66 TATTCAGAC
* ** * *
58228 -AGTGTACCTAGCAGG-TCTCGTGCTGGT-ATATTCGGGCAATGTGCCTAGTAGGCAT-ATGCCT
1 TA-TGTGCCTAGCAGGCT-TCGTGCTGGTGA-ATTCGGGCTGTGTGCCTAGTAGGCTTCATGCCG
* * *
58289 ATGTATTCGGGC
63 ATATATTCAGAC
*
58301 TGTGTGCCTAGCA
1 TATGTGCCTAGCA
58314 AGCCTTTATG
Statistics
Matches: 132, Mismatches: 22, Indels: 13
0.79 0.13 0.08
Matches are distributed among these distances:
73 30 0.23
74 100 0.76
75 2 0.02
ACGTcount: A:0.18, C:0.22, G:0.30, T:0.30
Consensus pattern (74 bp):
TATGTGCCTAGCAGGCTTCGTGCTGGTGAATTCGGGCTGTGTGCCTAGTAGGCTTCATGCCGATA
TATTCAGAC
Found at i:58224 original size:37 final size:37
Alignment explanation
Indices: 58183--58316 Score: 128
Period size: 37 Copynumber: 3.6 Consensus size: 37
58173 GTGCTAGTGA
*
58183 ATTCGGGCTGTGTGCCTAGCAAGCTTCATGCCGATAT
1 ATTCGGGCAGTGTGCCTAGCAAGCTTCATGCCGATAT
* * * * *
58220 ATTCGGGCAGTGTACCTAGC-AGGTCTCGTGCTGGTAT
1 ATTCGGGCAGTGTGCCTAGCAAGCT-TCATGCCGATAT
* * * * * *
58257 ATTCGGGCAATGTGCCTAGTAGGCAT-ATGCCTATGT
1 ATTCGGGCAGTGTGCCTAGCAAGCTTCATGCCGATAT
*
58293 ATTCGGGCTGTGTGCCTAGCAAGC
1 ATTCGGGCAGTGTGCCTAGCAAGC
58317 CTTTATGCTG
Statistics
Matches: 74, Mismatches: 21, Indels: 5
0.74 0.21 0.05
Matches are distributed among these distances:
36 28 0.38
37 45 0.61
38 1 0.01
ACGTcount: A:0.19, C:0.22, G:0.30, T:0.29
Consensus pattern (37 bp):
ATTCGGGCAGTGTGCCTAGCAAGCTTCATGCCGATAT
Found at i:59002 original size:17 final size:17
Alignment explanation
Indices: 58980--59018 Score: 60
Period size: 17 Copynumber: 2.3 Consensus size: 17
58970 CTCCACCTTG
* *
58980 ACAAGAATTCTCTACGA
1 ACAAGAACTCTCAACGA
58997 ACAAGAACTCTCAACGA
1 ACAAGAACTCTCAACGA
59014 ACAAG
1 ACAAG
59019 TTCTCCACCT
Statistics
Matches: 20, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
17 20 1.00
ACGTcount: A:0.46, C:0.26, G:0.13, T:0.15
Consensus pattern (17 bp):
ACAAGAACTCTCAACGA
Done.