Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012130.1 Kokia drynarioides strain JFW-HI SEQ_127129, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  116386

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1294--1378
43
2.0
43
86
4
118
30
11
10
47
1.74
1946--2074
45
2.9
45
90
0
195
31
26
22
19
1.98
2347--2414
14
4.9
13
75
19
50
50
23
2
23
1.63
2361--2425
28
2.3
28
89
5
96
47
26
4
21
1.70
2382--2425
14
3.1
14
75
12
54
47
25
6
20
1.74
5690--5742
21
2.5
22
81
9
65
0
35
0
64
0.94
5691--5741
4
12.2
4
79
8
57
0
33
0
66
0.92
5691--5741
13
4.1
13
80
7
61
0
33
0
66
0.92
5861--5886
2
13.0
2
100
0
52
50
50
0
0
1.00
6087--6117
9
3.3
9
95
4
53
77
0
0
22
0.77
17740--18062
161
2.0
161
98
0
619
32
19
16
31
1.94
33887--33945
29
2.0
30
81
15
70
27
8
11
52
1.66
56610--56647
18
2.1
18
85
9
51
15
13
10
60
1.59
60809--60840
13
2.3
15
89
10
50
37
9
21
31
1.85
70211--70268
26
2.1
28
84
12
77
46
0
5
48
1.24
70273--70328
21
2.5
23
75
13
64
55
8
1
33
1.42
77056--77118
32
1.9
33
93
3
110
55
12
11
20
1.67
88078--88505
125
3.5
119
81
8
452
30
16
14
38
1.88
88078--88524
120
3.7
122
80
9
441
30
17
14
37
1.89
88091--88524
60
7.1
61
69
10
246
31
17
13
38
1.88
89323--89377
17
3.5
17
69
19
55
60
3
10
25
1.47
89323--89420
30
3.3
30
88
2
126
61
4
7
27
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91748--92218
84
5.5
85
86
4
653
45
4
5
43
1.48
91748--92218
169
2.8
170
88
5
691
45
4
5
43
1.48
96220--96435
60
3.5
62
80
7
230
38
15
16
29
1.90
98375--98446
6
12.2
6
76
8
67
41
2
1
54
1.23
98375--98446
11
6.1
12
74
9
67
41
2
1
54
1.23
98381--98446
17
3.7
18
82
8
73
40
3
1
54
1.25
98353--98443
47
1.9
47
82
4
112
39
2
1
57
1.18
99171--99196
3
8.7
3
100
0
52
34
0
0
65
0.93
100263--100711
59
7.5
58
77
11
363
35
27
3
33
1.73
100267--100742
89
5.3
89
75
11
362
35
26
3
34
1.75
100267--100741
30
15.8
30
75
12
296
35
26
3
34
1.75
112002--112061
27
2.2
27
90
3
93
18
16
8
56
1.64
112550--113401
206
4.1
206
89
0
1208
37
20
21
21
1.95
113776--113816
17
2.4
17
87
0
55
46
2
2
48
1.28
114489--114559
3
23.3
3
74
8
54
59
2
1
36
1.21
114437--114498
31
2.0
31
87
0
88
46
4
6
41
1.51
114472--114526
21
2.6
21
81
16
53
60
1
1
36
1.18
115609--115859
30
8.5
30
77
8
192
39
26
2
32
1.69
115609--115859
59
4.2
57
81
9
231
39
26
2
32
1.69
115872--116083
29
7.2
31
82
8
146
32
24
6
37
1.80
115893--116083
59
3.3
59
83
3
181
32
24
6
36
1.81

Tables:   1

The End!