Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012154.1 Kokia drynarioides strain JFW-HI SEQ_127155, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  132088

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2835--2877
21
2.0
21
90
0
68
25
16
37
20
1.93
2883--3008
45
2.8
45
88
0
180
19
23
24
32
1.98
4941--4987
17
3.0
17
76
20
57
34
0
2
63
1.06
5248--5290
21
2.1
21
86
4
61
58
13
2
25
1.48
5635--5691
9
6.8
9
84
8
59
1
45
0
52
1.11
5664--5696
7
4.9
7
92
3
50
0
39
0
60
0.97
5688--5726
4
9.8
4
83
10
53
0
23
0
76
0.78
5671--5730
25
2.4
26
77
8
70
0
30
0
70
0.88
5686--5730
21
2.2
20
84
7
65
0
26
0
73
0.84
10760--10787
5
5.6
5
100
0
56
82
0
17
0
0.68
14033--14112
28
2.8
29
83
7
83
57
7
0
35
1.27
22188--22228
2
20.5
2
94
0
73
46
0
2
51
1.14
22385--22450
32
2.0
33
88
2
98
36
1
3
59
1.22
24030--24070
21
2.0
21
90
9
66
19
26
19
34
1.96
28922--28966
22
2.0
22
82
0
54
42
4
0
53
1.21
48425--48480
20
2.8
20
83
0
58
30
5
10
53
1.58
51954--52006
3
17.7
3
96
0
61
24
0
9
66
1.21
53797--53854
23
2.4
23
82
5
71
56
5
13
24
1.57
59256--59300
23
1.9
23
81
4
54
55
0
0
44
0.99
62867--62897
5
6.2
5
96
0
53
16
0
0
83
0.64
67898--67943
4
10.8
4
90
4
56
67
0
0
32
0.91
67900--67950
27
1.9
26
88
4
75
64
0
1
33
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69403--69428
13
2.0
13
100
0
52
7
15
15
61
1.55
82203--82235
4
8.2
4
93
0
57
54
0
21
24
1.45
83500--83539
20
2.0
20
85
0
53
42
20
7
30
1.79
85037--85177
71
2.0
71
85
0
192
41
19
19
19
1.91
87535--87862
164
2.0
163
95
1
586
39
23
14
23
1.91
97236--97337
51
2.0
51
100
0
204
39
9
25
25
1.86
97244--97326
27
3.2
27
63
16
75
37
9
27
25
1.87
107625--107670
17
2.7
17
96
0
83
19
21
26
32
1.97
131516--131548
17
1.9
17
93
0
57
75
0
24
0
0.80
131512--131566
28
2.0
27
82
3
65
70
0
29
0
0.87

Tables:   1

The End!