Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012160.1 Kokia drynarioides strain JFW-HI SEQ_127161, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58496

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5867--5891
6
4.2
6
100
0
50
84
0
0
16
0.63
8788--8843
21
2.7
20
76
20
53
35
1
0
62
1.06
8823--8878
23
2.3
23
81
6
58
46
3
0
50
1.19
17276--17305
2
15.0
2
100
0
60
50
0
0
50
1.00
17865--17940
13
6.1
12
71
27
52
63
0
2
34
1.09
17868--17930
19
3.4
19
67
16
51
63
0
3
33
1.10
17865--17940
26
3.0
25
75
20
70
63
0
2
34
1.09
18765--18831
22
3.2
22
91
6
104
38
0
5
55
1.25
21199--21282
6
14.7
6
68
22
56
44
1
3
51
1.26
21199--21280
17
4.8
17
83
0
110
42
1
3
52
1.26
21198--21280
34
2.4
34
91
0
139
43
1
3
51
1.26
22023--22066
15
2.8
15
86
10
61
50
2
0
47
1.13
23002--23159
30
5.4
28
82
9
165
36
25
3
33
1.74
23023--23159
30
4.6
30
85
5
179
37
27
2
32
1.72
23002--23159
59
2.7
60
85
5
189
36
25
3
33
1.74
23002--23168
89
1.9
89
83
0
217
35
28
4
32
1.76
34937--36210
205
6.2
205
90
0
1829
37
20
20
21
1.95
34936--36136
409
2.9
409
90
0
1859
36
20
20
21
1.95
34937--36148
614
2.0
614
91
1
1957
37
20
20
21
1.95
36518--36565
17
2.8
17
87
0
78
43
0
2
54
1.12
36518--36567
6
8.7
6
76
8
50
46
0
2
52
1.12
38300--38487
30
6.4
29
86
6
236
36
27
2
34
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38300--38487
59
3.2
57
87
5
259
36
27
2
34
1.71
38288--38504
30
7.3
29
81
7
222
34
28
3
33
1.73
38316--38504
87
2.1
87
81
6
220
34
30
3
32
1.74
39904--39943
17
2.2
17
86
8
53
62
2
2
32
1.22
46374--46662
151
1.9
151
92
1
481
36
10
19
33
1.85
47702--47736
17
2.1
17
88
0
52
48
0
0
51
1.00
53110--53182
3
24.3
3
100
0
146
67
0
0
32
0.91
53942--53968
3
9.0
3
100
0
54
0
66
0
33
0.92
56617--56809
97
2.0
96
84
5
255
37
13
18
30
1.90
57024--57086
28
2.2
28
86
8
83
26
11
28
33
1.91
57063--57353
59
4.9
60
79
7
264
34
4
28
32
1.78
57071--57360
30
9.8
29
75
13
231
34
4
27
33
1.77

Tables:   1

The End!