Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012161.1 Kokia drynarioides strain JFW-HI SEQ_127162, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58718

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4538--4582
22
2.0
23
87
12
67
55
0
0
44
0.99
6185--6222
15
2.4
17
86
8
53
34
5
0
60
1.19
7222--7289
25
2.9
22
75
14
64
67
2
7
22
1.29
7445--7510
28
2.2
28
84
7
78
30
6
13
50
1.66
7698--7778
29
2.7
29
78
10
76
41
12
11
34
1.78
11003--11037
17
2.1
17
94
0
61
51
2
5
40
1.40
13124--13176
3
17.3
3
96
3
97
66
0
0
33
0.92
15955--16007
24
2.2
24
86
0
70
16
1
32
49
1.57
17696--17799
36
2.9
36
86
1
136
22
27
13
36
1.92
21376--21410
17
2.1
17
100
0
70
25
17
17
40
1.90
27247--27350
20
5.2
20
76
0
100
11
26
22
39
1.88
31856--31923
21
3.2
21
87
0
82
27
8
25
38
1.85
34053--34107
17
3.2
16
82
12
65
38
3
3
54
1.36
34756--34851
3
32.3
3
93
2
167
63
0
1
35
1.01
35056--35089
3
11.0
3
93
6
59
64
2
0
32
1.08
35962--36177
30
7.3
29
69
15
88
28
24
4
43
1.73
35963--36085
30
4.1
29
78
14
90
29
21
4
44
1.72
35944--36113
59
2.9
59
77
11
170
31
22
4
41
1.74
35984--36209
59
3.8
60
79
9
216
30
23
3
42
1.72
35979--36120
30
4.8
29
76
14
121
28
23
4
43
1.72
43246--43288
18
2.3
19
80
4
52
58
2
34
4
1.32
49590--49871
29
9.6
29
79
7
268
35
26
4
33
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49590--49871
58
4.8
58
84
6
354
35
26
4
33
1.76
49590--49865
117
2.4
117
89
1
410
35
26
4
33
1.76
49825--49903
38
2.1
38
83
9
99
36
25
2
35
1.70
49899--50035
29
4.7
28
71
16
100
37
28
2
31
1.69
49871--50035
58
2.8
57
79
6
179
36
26
2
33
1.70
49871--50036
59
2.8
60
79
5
187
36
27
2
33
1.70
50018--50078
28
2.1
29
90
3
97
37
31
8
22
1.84

Tables:   1

The End!