Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012178.1 Kokia drynarioides strain JFW-HI SEQ_127179, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17813

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
897--1083
96
1.9
96
84
6
245
37
13
18
30
1.90
1298--1359
27
2.2
27
82
5
70
24
4
32
38
1.76
1375--1622
59
4.2
59
78
8
152
32
4
29
33
1.79
1421--1767
30
11.9
29
75
11
273
32
5
28
33
1.79
1424--1767
58
5.9
58
81
7
319
32
5
28
33
1.79
1434--1744
88
3.6
87
85
8
332
33
4
28
33
1.77
2847--2872
3
8.7
3
100
0
52
34
0
0
65
0.93
3480--3538
17
3.5
17
78
0
64
47
5
1
45
1.34
3851--4552
205
3.4
205
88
0
902
21
22
19
35
1.96
4480--4601
49
2.5
49
89
0
181
20
28
19
31
1.97
4528--5203
133
5.2
133
77
7
738
22
26
17
33
1.96
4866--4987
49
2.5
49
90
0
190
22
29
18
30
1.97
4275--5325
386
2.7
387
94
0
1798
21
25
19
34
1.96
5048--5495
205
2.2
207
86
3
618
22
23
19
35
1.96
16193--16231
21
1.9
20
84
5
51
56
10
10
23
1.63
16322--16663
58
5.9
59
76
9
172
33
3
28
34
1.73
16442--16758
29
10.8
29
80
8
320
32
2
27
37
1.72
16401--16719
59
5.5
58
80
8
308
32
2
27
37
1.72
16442--16725
30
9.6
30
81
5
305
33
2
27
37
1.69
16442--16762
30
10.9
28
79
9
277
32
2
28
36
1.72
17335--17400
30
2.2
30
83
5
80
9
43
27
19
1.81
17785--17813
3
9.7
3
100
0
58
65
0
0
34
0.93

Tables:   1

The End!