Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012182.1 Kokia drynarioides strain JFW-HI SEQ_127183, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  127265

Tables:   1   

This is table  1  of  1  ( 54 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
510--879
59
6.3
59
89
2
541
31
30
6
31
1.82
510--826
29
10.9
28
75
15
277
31
30
5
31
1.81
1127--1388
104
2.7
96
84
10
375
28
21
12
33
1.90
4718--4775
22
2.6
22
80
0
71
29
17
18
34
1.94
6594--6620
2
13.5
2
100
0
54
48
0
0
51
1.00
14847--14881
18
1.9
18
94
0
61
65
25
0
8
1.21
17170--17209
18
2.1
20
86
9
57
70
0
12
17
1.18
17836--17868
14
2.2
16
89
10
52
0
12
9
78
0.95
18466--18523
30
1.9
30
96
0
107
13
29
5
51
1.63
32367--32447
43
1.9
41
85
5
108
23
8
30
37
1.85
32881--32915
4
8.8
4
100
0
70
25
0
25
48
1.51
34048--34208
60
2.7
61
75
6
175
23
18
11
46
1.81
34382--34478
28
3.2
31
69
21
87
47
12
15
24
1.80
34349--34503
60
2.5
60
87
2
211
45
12
16
25
1.82
35991--36039
7
7.1
7
97
2
91
14
0
0
85
0.59
38771--38847
31
2.7
27
80
11
73
36
3
24
35
1.74
44056--44101
24
1.9
23
86
8
65
54
4
4
36
1.40
47507--47549
16
2.8
16
86
6
63
74
0
13
11
1.07
54547--54626
17
4.7
17
87
0
115
42
0
3
53
1.18
54547--54628
6
14.3
6
72
19
59
43
0
3
52
1.18
54705--54743
15
2.5
15
87
4
51
43
30
7
17
1.77
56388--56833
29
15.1
29
76
11
374
35
30
2
32
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56419--56845
59
7.2
58
88
5
554
36
29
1
32
1.66
56419--56884
30
15.7
29
75
8
361
36
29
1
32
1.66
68629--69178
206
2.7
206
93
2
944
34
20
22
22
1.97
69624--69703
17
4.7
17
88
0
124
43
0
2
53
1.14
69624--69705
6
14.3
6
72
19
68
45
0
2
52
1.14
70654--70705
6
9.0
6
76
23
58
46
0
1
51
1.12
70656--70703
17
2.8
17
90
9
80
45
0
2
52
1.12
69653--71643
1000
2.0
990
99
0
3892
39
20
13
25
1.89
72511--72988
29
16.2
29
82
8
504
35
29
2
32
1.70
72511--72988
59
8.1
59
85
6
542
35
29
2
32
1.70
73221--73395
96
1.8
96
82
7
230
29
21
13
35
1.91
75007--75143
21
6.5
21
68
13
75
12
5
16
65
1.43
80525--80554
12
2.6
12
94
5
53
76
6
0
16
0.99
96781--96821
18
2.3
18
87
8
57
60
0
4
34
1.18
102075--102128
24
2.1
26
90
10
85
50
11
27
11
1.72
107311--107335
13
1.9
13
100
0
50
32
0
32
36
1.58
110031--110088
30
2.0
30
86
3
82
39
3
5
51
1.41
110907--111045
69
2.0
69
97
0
260
31
7
13
46
1.72
112893--112935
18
2.4
18
80
7
52
44
2
0
53
1.13
113159--113279
31
3.9
30
76
4
98
24
17
9
47
1.78
113515--113703
58
3.2
59
87
4
265
43
12
19
24
1.85
116238--116269
11
2.9
11
95
0
55
50
18
25
6
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
117611--117660
18
2.7
18
80
17
57
22
0
4
74
0.99
117815--117875
29
2.0
29
81
6
68
55
1
3
39
1.26
118197--118248
23
2.3
22
81
12
61
53
11
3
30
1.54
120805--120857
24
2.2
24
96
3
99
35
7
32
24
1.84
120828--121163
144
2.3
144
93
0
564
32
15
25
26
1.95
120828--121211
144
2.7
142
82
9
463
32
16
23
27
1.96
123630--123722
44
2.1
45
91
2
152
30
5
8
55
1.52
124443--124538
17
5.5
17
80
3
102
34
2
5
58
1.32
126438--126678
59
4.1
59
79
6
247
39
24
4
31
1.74
126438--126693
29
8.7
29
74
12
166
37
25
4
32
1.76

Tables:   1

The End!