Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012195.1 Kokia drynarioides strain JFW-HI SEQ_127196, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96429

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
179--264
4
21.2
4
77
11
77
0
36
0
63
0.94
186--265
20
3.9
20
87
9
108
0
37
0
62
0.95
179--264
17
5.3
17
81
13
92
0
36
0
63
0.94
8589--8617
6
4.8
6
100
0
58
34
0
0
65
0.93
8766--8946
67
2.8
65
86
7
253
40
0
3
55
1.20
8769--8946
63
2.8
64
84
9
238
41
0
3
55
1.21
15375--15439
34
1.9
34
87
0
94
50
6
7
35
1.56
17149--17188
20
2.0
20
100
0
80
15
30
10
45
1.78
24769--25039
137
2.0
138
82
2
337
29
19
10
39
1.86
28794--28829
16
2.2
16
90
0
54
50
5
5
38
1.49
32277--32322
23
2.0
24
83
12
60
34
2
0
63
1.07
40599--40663
6
10.3
6
79
15
69
36
0
63
0
0.95
40920--40970
12
3.6
15
84
15
65
58
0
0
41
0.98
40919--40967
21
2.3
20
80
10
62
59
0
0
40
0.98
40920--40971
27
2.0
26
88
11
79
57
0
0
42
0.98
71842--71883
13
3.1
14
80
13
52
50
35
0
14
1.43
71955--71979
6
4.2
6
100
0
50
16
0
36
48
1.46
73701--73793
31
3.0
31
68
6
80
54
13
4
26
1.58
75179--75205
14
1.9
14
100
0
54
0
7
7
85
0.75
79815--79857
15
2.8
16
85
7
52
34
2
4
58
1.32
79807--79867
17
3.8
15
78
10
59
34
3
3
59
1.30
84683--84719
19
2.0
18
94
5
65
70
8
0
21
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93248--93299
23
2.3
23
89
0
86
30
11
0
57
1.34
95110--95301
96
2.0
96
82
6
237
38
12
19
30
1.88
95506--95577
28
2.5
29
81
4
83
31
8
25
34
1.85
95517--95576
28
2.1
28
87
0
84
28
8
26
36
1.85
95592--95757
59
2.8
59
83
0
179
40
8
22
28
1.83
95710--95928
29
7.6
28
78
12
203
34
2
26
36
1.69
95710--95936
59
3.9
56
78
8
206
34
2
25
37
1.69
95711--95928
115
1.9
115
81
9
266
34
2
26
36
1.69

Tables:   1

The End!