Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012200.1 Kokia drynarioides strain JFW-HI SEQ_127201, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  111160

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1568--1593
6
4.3
6
100
0
52
15
30
0
53
1.42
8573--8617
23
2.0
22
82
8
54
51
4
31
13
1.61
14065--14224
40
4.1
40
94
1
270
35
2
8
53
1.45
14059--14224
79
2.1
79
92
2
271
35
2
8
53
1.44
16302--16396
47
2.0
47
95
0
172
26
17
20
35
1.95
17649--17682
17
1.9
18
94
5
61
55
11
14
17
1.68
17653--17707
21
2.5
23
80
16
64
54
10
16
18
1.70
17776--17805
16
1.9
15
93
6
51
0
23
10
66
1.21
33776--33903
36
3.8
36
82
11
164
31
16
29
22
1.96
33848--33902
28
2.0
28
96
0
101
30
18
29
21
1.97
35831--35870
12
3.2
12
82
6
53
75
0
12
12
1.06
35837--35871
13
2.7
13
86
0
52
77
0
11
11
1.00
35849--35894
19
2.3
20
85
3
67
73
0
17
8
1.07
42811--42853
19
2.2
20
84
12
63
34
0
4
60
1.17
54006--54056
26
2.0
26
96
0
93
37
5
0
56
1.23
59509--59552
23
2.0
22
86
4
61
47
6
31
13
1.69
64813--64862
20
2.5
20
83
9
57
40
14
0
46
1.44
65478--65527
20
2.5
20
83
9
57
40
14
0
46
1.44
74909--74970
31
2.0
31
90
3
99
50
14
0
35
1.43
75028--75105
21
3.5
22
76
10
70
37
0
12
50
1.41
86736--86783
18
2.7
18
80
0
60
22
31
0
45
1.53
86736--86780
6
7.5
6
84
0
54
22
33
0
44
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86737--86780
12
3.7
12
87
0
61
22
34
0
43
1.54
90535--90581
17
2.8
17
86
0
58
36
2
6
55
1.37
90547--90606
17
3.5
18
77
8
63
31
3
11
53
1.53
91536--91580
18
2.6
18
85
3
56
57
4
17
20
1.56
92320--92596
29
9.5
30
71
17
131
37
25
3
32
1.73
92320--92614
28
10.2
28
72
13
172
37
26
4
31
1.75
92342--92623
57
4.9
58
78
11
267
36
26
4
31
1.76
95505--95548
16
2.7
17
82
10
56
56
0
0
43
0.99
95559--95597
18
2.2
19
86
9
55
66
2
0
30
1.05
98801--98996
57
3.2
57
75
18
180
51
4
3
41
1.38
98864--98997
68
2.0
67
81
10
157
52
3
3
39
1.37
99407--99448
18
2.3
19
87
4
59
38
2
4
54
1.34
105377--105459
41
2.0
41
95
0
148
39
16
28
14
1.88
106121--106187
33
2.0
33
100
0
134
40
11
11
35
1.79
106361--106402
20
2.1
20
86
8
59
16
11
14
57
1.66
106969--107014
14
3.4
14
79
8
51
60
2
0
36
1.09
107197--107247
23
2.2
24
89
3
77
35
13
0
50
1.42
107225--107256
15
2.1
15
94
0
55
37
21
0
40
1.54

Tables:   1

The End!