Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012207.1 Kokia drynarioides strain JFW-HI SEQ_127208, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40492

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1098--1204
30
3.6
30
84
1
135
28
26
28
16
1.97
1390--1446
6
9.3
6
81
11
53
21
3
0
75
0.95
5190--5244
14
3.9
14
85
0
74
40
5
5
49
1.49
5186--5249
28
2.3
28
80
0
83
37
4
4
53
1.43
8562--8636
22
3.4
22
94
0
132
32
12
21
34
1.90
8913--8967
14
3.9
14
85
0
74
40
5
5
49
1.49
8909--8972
28
2.3
28
80
0
83
37
4
4
53
1.43
9169--9544
186
2.0
186
99
0
743
28
17
14
40
1.88
11426--11480
20
2.8
19
86
8
67
36
1
1
60
1.18
19404--19505
27
3.8
27
85
2
143
22
15
26
35
1.94
19488--19645
24
6.6
24
83
6
205
29
19
20
31
1.97
19488--19645
72
2.2
72
92
3
257
29
19
20
31
1.97
20620--20664
10
4.3
10
81
10
54
77
4
17
0
0.92
27486--27533
21
2.3
21
85
0
60
33
27
12
27
1.92
28274--28826
52
10.6
52
89
2
779
35
23
13
26
1.93
29282--29329
20
2.3
22
78
7
55
45
0
14
39
1.45
33132--33165
13
2.6
13
95
0
59
35
14
23
26
1.94
37288--37339
18
3.0
18
83
10
65
25
7
0
67
1.17
37337--37361
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!