Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012210.1 Kokia drynarioides strain JFW-HI SEQ_127211, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66538

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
136--198
16
3.9
16
76
17
58
80
11
0
7
0.89
160--192
13
2.5
13
95
0
57
87
3
0
9
0.63
1741--1857
27
4.3
27
72
11
96
29
12
1
55
1.47
1777--1878
28
3.7
27
71
11
73
24
14
0
59
1.41
1770--1885
55
2.1
55
87
6
164
28
12
0
57
1.41
6495--6539
7
6.4
7
80
10
56
82
0
15
2
0.77
6479--6518
20
2.0
21
90
5
64
77
0
22
0
0.77
6495--6539
15
3.2
14
81
9
56
82
0
15
2
0.77
6478--6544
28
2.3
29
80
14
77
76
0
20
2
0.92
7711--8195
42
11.8
42
81
5
544
30
25
17
26
1.97
7711--8195
123
4.0
121
81
5
530
30
25
17
26
1.97
7711--8195
165
2.9
164
82
4
559
30
25
17
26
1.97
9498--9540
21
2.0
21
95
0
77
37
23
11
27
1.89
19667--19888
42
5.4
42
79
6
213
31
27
14
26
1.95
19664--19892
83
2.8
83
86
1
318
31
28
14
25
1.95
19664--19930
83
3.3
82
82
3
308
31
27
14
26
1.95
19952--20139
91
2.1
91
86
6
256
34
25
15
25
1.95
19862--20132
45
6.2
45
78
9
217
34
23
16
25
1.95
19740--20139
46
9.4
45
76
11
226
33
25
15
25
1.95
20712--20753
21
2.0
21
95
0
75
45
21
23
9
1.81
21266--21301
16
2.2
16
90
0
54
72
2
0
25
0.98
22213--22299
28
3.1
27
73
6
93
31
13
0
55
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22727--22946
113
2.0
112
80
5
250
31
10
16
40
1.83
24722--24785
31
2.1
30
85
2
83
32
10
14
42
1.80
26760--26838
35
2.3
35
97
0
149
25
27
7
39
1.83
27251--27307
25
2.3
25
100
0
114
29
22
7
40
1.80
39285--39325
15
2.7
15
96
0
73
31
12
4
51
1.60
41879--41971
46
2.0
46
100
0
186
22
17
8
51
1.72
44140--44317
88
2.0
88
96
0
329
39
10
15
34
1.81
47390--47428
16
2.4
16
91
0
69
25
20
28
25
1.99
47545--47592
24
2.0
24
100
0
96
20
12
33
33
1.90
49807--50070
108
2.5
108
81
1
289
25
18
20
35
1.95
54417--54872
23
19.8
23
87
0
543
48
11
5
33
1.64
54417--54872
69
6.6
69
90
1
635
48
11
5
33
1.64
56973--57037
20
3.3
19
75
14
60
46
16
7
29
1.75
60499--60531
11
3.0
11
90
0
57
63
3
0
33
1.10
61106--61353
118
2.1
118
81
3
293
24
22
10
42
1.85
61997--62043
23
2.0
23
84
8
60
74
0
4
21
0.99
62011--62044
18
1.9
17
88
5
50
76
0
5
17
0.98
65357--65395
19
2.1
19
100
0
78
15
23
15
46
1.83

Tables:   1

The End!