Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012234.1 Kokia drynarioides strain JFW-HI SEQ_127235, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  113738

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
2
18.5
2
100
0
74
48
0
0
51
1.00
923--955
14
2.4
14
94
0
57
63
6
0
30
1.18
4653--7300
897
3.0
892
92
2
4388
39
16
9
34
1.82
14321--14350
11
2.7
11
94
0
51
20
0
13
66
1.24
23993--24035
17
2.5
17
88
3
59
20
27
2
48
1.62
27325--27564
30
8.1
30
85
3
274
38
1
22
38
1.62
27338--27564
89
2.5
88
86
3
294
38
1
22
37
1.63
27339--27564
59
3.8
59
86
2
283
38
1
22
37
1.63
29615--29671
15
3.5
15
73
17
60
52
0
0
47
1.00
30607--30689
21
3.9
22
73
6
71
30
0
20
49
1.49
41883--41927
19
2.3
19
84
7
54
55
8
4
31
1.51
50964--51088
53
2.4
53
82
2
144
31
34
12
22
1.90
50957--51123
53
3.2
51
75
6
138
30
30
14
23
1.95
53706--53751
24
2.0
25
87
12
71
41
2
4
52
1.33
54628--54681
17
3.1
17
79
15
56
51
3
0
44
1.19
54628--54663
18
2.0
18
89
10
56
52
2
0
44
1.15
58459--58499
15
2.7
15
88
3
64
68
7
2
21
1.26
58767--58808
11
3.8
11
84
9
59
45
0
0
54
0.99
59664--59697
13
2.7
13
95
4
61
35
0
64
0
0.94
59664--59715
12
4.2
12
85
4
50
42
0
55
1
1.10
59667--59705
19
2.1
19
90
0
60
35
0
64
0
0.94
59664--59697
6
5.5
6
93
6
59
35
0
64
0
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59769--59809
11
3.8
11
87
3
57
53
0
0
46
1.00
62684--62773
44
2.0
44
97
0
171
20
10
25
44
1.82
63326--63376
20
2.5
19
81
15
50
35
27
5
31
1.81
64665--64690
12
2.2
12
100
0
52
7
7
34
50
1.60
70769--70820
27
1.9
27
84
7
70
57
9
9
23
1.60
71535--71592
15
3.9
15
74
0
53
25
20
22
31
1.98
73366--73395
14
2.1
14
100
0
60
23
16
6
53
1.66
81904--81970
21
3.3
21
64
35
56
40
23
2
32
1.70
81897--81976
40
2.0
40
100
0
160
40
25
2
32
1.69
87299--87364
3
22.7
3
73
17
59
71
1
3
24
1.09
87971--88125
75
2.1
76
81
6
181
27
24
21
27
1.99
92122--92156
17
2.1
17
94
0
61
25
11
8
54
1.64
98429--98740
86
3.7
85
85
7
347
21
16
28
33
1.95
99629--99674
21
2.2
21
88
0
65
21
15
30
32
1.94
100702--100749
24
2.0
24
87
0
69
22
6
50
20
1.71
102322--102387
11
6.4
11
67
19
52
36
1
3
59
1.22
102323--102397
17
4.4
17
76
8
80
41
2
2
53
1.29
102338--102382
23
2.0
23
86
0
63
40
2
4
53
1.33
103224--103262
19
2.0
20
95
5
71
64
0
0
35
0.94
104392--104549
58
2.7
58
83
7
203
36
28
1
32
1.68
104392--104620
30
7.7
29
77
11
207
36
26
2
34
1.69

Tables:   1

The End!