Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012242.1 Kokia drynarioides strain JFW-HI SEQ_127243, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  105331

Tables:   1   

This is table  1  of  1  ( 56 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
289--318
6
5.0
6
100
0
60
66
0
33
0
0.92
8880--8931
21
2.5
21
75
6
52
32
28
13
25
1.93
9639--9689
24
2.1
24
85
0
66
25
23
23
27
2.00
13156--13222
34
2.0
34
100
0
134
22
8
23
44
1.81
15342--15392
26
2.0
26
84
7
68
50
3
5
39
1.45
15338--15400
26
2.4
26
76
7
65
55
3
6
34
1.41
17167--17246
37
2.1
37
80
11
90
66
7
0
26
1.18
17427--17466
12
3.3
12
89
0
62
72
10
5
12
1.26
17373--17478
24
4.4
24
72
4
79
66
18
5
8
1.38
17471--17520
21
2.4
21
100
0
100
62
18
8
12
1.53
17471--17520
10
4.7
11
70
9
50
62
18
8
12
1.53
17914--18102
29
6.8
28
77
6
170
20
15
10
53
1.71
18665--18704
20
2.0
20
100
0
80
35
0
35
30
1.58
19110--19232
63
1.9
64
90
1
194
30
20
30
17
1.96
19369--19465
39
2.5
39
82
0
104
42
17
16
23
1.89
20413--20545
36
3.7
36
93
0
212
33
3
16
46
1.65
20415--20654
36
6.2
36
77
12
201
33
6
17
43
1.74
20528--20692
45
3.7
45
85
1
206
34
6
16
42
1.74
20528--20692
90
1.8
90
85
2
233
34
6
16
42
1.74
20885--20957
36
2.0
36
83
0
92
36
4
13
45
1.63
23130--23171
15
2.8
16
82
10
52
21
4
0
73
1.01
24070--24124
23
2.4
23
93
0
92
36
0
9
54
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31068--31149
29
2.7
30
86
5
112
51
13
1
34
1.49
31991--32038
24
2.0
24
87
0
69
20
31
0
47
1.50
38168--38210
18
2.5
17
78
10
52
62
0
2
34
1.08
38173--38212
18
2.2
18
90
0
62
70
0
2
27
1.01
41741--41780
21
1.9
21
84
0
53
27
12
22
37
1.90
42906--42930
10
2.5
10
100
0
50
76
0
0
24
0.80
43820--43876
24
2.4
24
84
0
78
26
8
8
56
1.59
45810--45864
24
2.3
24
87
0
74
25
10
10
52
1.69
49721--49776
29
1.9
29
89
7
87
57
8
0
33
1.30
49727--49802
29
2.5
29
85
6
89
53
11
0
34
1.37
64169--64474
29
10.7
27
72
13
141
33
3
26
35
1.75
64173--64337
57
2.9
57
80
7
156
34
3
26
35
1.74
64238--64484
87
2.8
87
82
10
258
35
3
25
35
1.72
64287--64496
30
7.2
29
74
11
135
37
3
23
34
1.73
66005--66041
19
2.0
19
89
5
58
13
5
32
48
1.65
66053--66136
34
2.5
33
90
1
132
58
5
1
34
1.30
66042--66136
17
5.5
17
79
5
102
57
5
1
35
1.28
66565--67123
39
14.4
39
71
7
303
25
19
30
24
1.98
66622--67138
78
6.6
78
79
3
468
25
19
29
24
1.98
77687--77721
16
2.1
17
89
5
54
51
14
5
28
1.65
78719--79003
57
4.9
59
75
14
218
33
3
27
35
1.74
78653--79060
59
7.0
59
77
10
263
34
2
25
36
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
78663--79060
29
13.7
29
76
11
264
34
3
25
36
1.72
80569--80610
20
2.1
20
86
8
59
33
4
11
50
1.60
80601--80698
6
17.2
6
72
15
66
55
5
0
39
1.22
80610--80683
17
4.4
17
76
10
71
52
6
0
40
1.28
80611--80676
16
4.0
16
72
18
55
54
6
0
39
1.25
87622--87688
3
23.3
3
71
8
50
1
29
1
67
1.09
87622--87665
20
2.3
20
84
7
56
2
31
0
65
1.05
92342--92395
28
1.9
28
88
0
81
22
25
16
35
1.95
96636--96718
28
3.0
28
92
0
139
22
28
15
32
1.95
96692--96790
36
2.8
36
87
0
144
24
27
13
35
1.92
103791--103821
16
1.9
16
100
0
62
45
9
0
45
1.36
105256--105323
7
10.1
7
78
9
70
52
2
44
0
1.16

Tables:   1

The End!