Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012259.1 Kokia drynarioides strain JFW-HI SEQ_127260, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65094

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1846--2439
199
3.0
199
89
3
879
35
18
25
20
1.95
2805--2882
6
13.5
6
75
12
74
42
1
2
53
1.22
2825--2880
11
4.9
11
80
10
51
37
1
3
57
1.27
2790--2882
17
5.4
17
86
2
123
40
1
3
54
1.23
2805--2882
23
3.4
23
77
12
54
42
1
2
53
1.22
4815--5010
30
6.6
29
75
10
137
40
29
2
27
1.69
4812--5075
60
4.4
58
78
8
201
38
29
3
28
1.73
4874--5075
30
6.8
29
72
10
124
39
29
3
27
1.73
4845--5075
60
3.9
59
80
10
222
38
29
3
28
1.72
14878--14925
26
1.9
26
87
8
73
50
0
16
33
1.46
15488--15522
18
2.1
18
89
10
56
40
2
0
57
1.14
15487--15579
28
3.4
26
73
21
75
39
3
3
53
1.33
16881--16914
17
1.9
18
88
5
52
23
8
0
67
1.18
18953--19002
6
8.5
6
77
4
57
46
4
0
50
1.20
20781--20884
30
3.5
31
79
9
117
36
22
2
38
1.69
20781--20888
29
3.7
29
77
10
103
36
24
2
37
1.70
20781--20913
59
2.3
59
84
7
173
36
22
3
37
1.70
21242--21425
96
1.9
96
85
6
257
28
19
14
36
1.91
21558--21594
16
2.3
16
100
0
74
29
24
5
40
1.77
24893--24919
2
13.5
2
100
0
54
51
0
48
0
1.00
28129--28184
19
3.1
18
73
21
55
32
0
3
64
1.11
31380--31422
18
2.4
18
80
7
52
46
4
0
48
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31872--31901
8
3.6
8
95
4
51
66
0
0
33
0.92
39187--39224
19
2.0
20
94
5
69
28
5
5
60
1.40
41284--41324
7
6.0
7
94
5
75
0
12
0
87
0.53
46196--46268
27
2.7
27
82
2
83
28
1
26
43
1.63
56339--56383
24
1.9
24
90
4
74
46
20
26
6
1.75

Tables:   1

The End!