Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01012265.1 Kokia drynarioides strain JFW-HI SEQ_127266, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 13546
ACGTcount: A:0.31, C:0.19, G:0.18, T:0.33

Warning! 1 characters in sequence are not A, C, G, or T


Found at i:8788 original size:49 final size:49

Alignment explanation


    Indices: 8732--8829  Score: 196
    Period size: 49  Copynumber: 2.0  Consensus size: 49

       8722 TGATGCGTGG

                                                             
       8732 ATAATTATAGACCTTGCTTTGGGTGAAGATTCCACTTCAGCATGACATT
          1 ATAATTATAGACCTTGCTTTGGGTGAAGATTCCACTTCAGCATGACATT

                                                             
       8781 ATAATTATAGACCTTGCTTTGGGTGAAGATTCCACTTCAGCATGACATT
          1 ATAATTATAGACCTTGCTTTGGGTGAAGATTCCACTTCAGCATGACATT

       8830 TTGGTAACGG


Statistics
Matches: 49,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  49   49  1.00

ACGTcount: A:0.29, C:0.18, G:0.18, T:0.35


Consensus pattern (49 bp):   
ATAATTATAGACCTTGCTTTGGGTGAAGATTCCACTTCAGCATGACATT
Done.