Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001227.1 Kokia drynarioides strain JFW-HI SEQ_112585, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100743

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--146
23
5.3
23
83
5
115
10
22
22
44
1.83
44--189
69
2.1
68
85
12
190
11
23
21
43
1.85
20222--20260
14
3.0
13
85
7
53
35
0
2
61
1.10
22878--22950
17
4.6
17
68
16
50
41
4
12
42
1.61
24624--24703
28
3.0
28
72
20
71
36
1
3
58
1.24
29877--29910
16
2.1
16
88
0
50
20
14
8
55
1.65
36639--36706
17
3.8
18
74
18
61
30
0
1
67
0.99
36635--36731
45
2.1
46
83
12
121
29
1
1
68
1.03
36632--36707
16
5.0
15
72
16
59
28
0
1
69
0.96
37651--37681
7
4.4
7
95
0
53
25
3
12
58
1.50
38442--38502
18
3.4
18
78
13
72
31
36
4
27
1.78
54634--54696
26
2.3
28
83
8
85
52
4
11
31
1.58
58607--58643
16
2.2
17
86
13
51
59
5
2
32
1.34
61525--61583
31
1.9
31
89
0
91
54
1
8
35
1.41
62722--62801
29
2.6
30
88
5
108
31
5
16
47
1.68
63748--63790
14
3.0
14
89
3
59
48
6
4
39
1.51
63753--63791
14
2.8
14
92
0
60
46
7
7
38
1.61
75616--75655
2
20.0
2
94
0
71
0
52
0
47
1.00
82560--82597
15
2.3
18
82
17
55
63
0
7
28
1.23
82559--82597
17
2.3
17
86
8
53
64
0
7
28
1.21
89648--89678
9
3.4
9
90
0
53
61
0
32
6
1.21
94460--94488
2
14.5
2
100
0
58
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98687--98729
20
2.2
20
83
8
52
25
2
4
67
1.22

Tables:   1

The End!