Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012278.1 Kokia drynarioides strain JFW-HI SEQ_127279, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30492

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1678--1987
59
5.3
59
89
2
437
35
26
1
35
1.67
1677--2001
29
11.0
28
72
12
190
35
27
2
35
1.69
1678--2046
177
2.1
177
84
5
478
34
26
2
35
1.72
13104--13171
27
2.3
30
78
19
88
19
17
7
55
1.64
13112--13171
27
2.2
27
93
3
102
18
18
8
55
1.67
13743--14287
205
2.6
206
88
1
770
35
20
22
21
1.96
14559--14620
17
3.7
16
87
6
63
43
0
1
54
1.09
14569--14622
6
9.2
6
75
24
53
48
0
1
50
1.11
14566--14620
17
3.2
17
89
5
85
43
0
1
54
1.10
26464--26531
27
2.3
30
78
19
88
19
17
7
55
1.64
26472--26531
27
2.2
27
93
3
102
18
18
8
55
1.67
27103--27647
205
2.6
206
88
1
770
35
20
22
21
1.96
27919--27980
17
3.7
16
87
6
63
43
0
1
54
1.09
27929--27982
6
9.2
6
75
24
53
48
0
1
50
1.11
27926--27980
17
3.2
17
89
5
85
43
0
1
54
1.10
29781--30091
29
10.9
30
72
12
262
36
28
3
32
1.73
29783--30091
59
5.4
59
85
8
424
36
28
3
31
1.73
29952--30046
50
1.9
49
97
2
181
37
28
4
29
1.76
29894--30091
108
1.8
108
90
2
317
36
29
3
30
1.74

Tables:   1

The End!