Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012289.1 Kokia drynarioides strain JFW-HI SEQ_127290, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49256

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3748--3827
39
2.0
40
87
2
117
31
17
20
31
1.95
8624--8717
39
2.4
40
82
10
99
28
18
21
31
1.96
8641--8717
39
1.9
39
89
2
118
29
16
20
32
1.95
10189--10244
15
3.7
15
87
0
76
37
16
26
19
1.92
10189--10251
15
4.2
15
82
8
74
36
14
30
19
1.91
10807--10923
23
5.1
22
83
6
94
38
25
24
11
1.88
10863--10939
23
3.3
23
87
7
86
40
23
25
10
1.86
15652--15711
24
2.5
23
76
15
59
26
6
1
65
1.27
15651--15711
25
2.5
24
76
7
61
26
6
1
65
1.26
15839--15871
13
2.4
14
90
5
50
33
12
21
33
1.90
15914--15955
22
1.9
22
90
9
68
19
0
38
42
1.51
16405--16457
17
3.4
17
65
24
53
71
1
11
15
1.22
16407--16466
29
2.1
29
100
0
120
70
3
10
16
1.29
16756--16798
23
1.9
23
85
4
61
23
6
9
60
1.51
23879--23926
19
2.5
19
82
0
51
60
0
2
37
1.09
24149--24192
18
2.5
17
82
10
61
31
2
2
63
1.19
25571--25602
16
2.0
16
93
0
55
34
6
12
46
1.67
26789--26828
19
2.0
20
85
4
55
42
22
0
35
1.54
26961--27028
22
3.0
22
86
2
91
41
16
25
17
1.89
29487--29538
25
2.1
25
96
0
95
36
1
19
42
1.62
29872--30277
93
4.4
92
74
12
353
24
24
17
33
1.97
30419--30837
42
10.5
41
74
11
311
27
15
25
30
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30476--30830
77
4.5
77
85
3
372
27
16
25
31
1.97
31133--31373
50
4.9
49
75
9
170
17
31
16
34
1.92
31116--32017
49
18.2
50
69
12
253
20
30
14
34
1.93
31116--32042
99
9.4
98
80
3
833
20
30
14
33
1.93
31190--32017
395
2.1
396
84
3
1067
21
30
14
33
1.93
33225--33255
16
1.9
16
93
0
53
6
0
9
83
0.79
34500--34692
75
2.6
74
77
6
196
25
29
17
27
1.97
42532--42569
11
3.3
12
89
10
62
78
0
5
15
0.91
42913--42972
17
3.5
17
75
13
52
23
3
3
70
1.18
44843--44919
37
2.1
37
87
4
111
38
27
9
24
1.85
46149--46265
55
2.1
55
85
0
162
22
25
21
30
1.98
46976--47019
22
2.0
22
86
8
63
34
4
2
59
1.30
47497--47578
31
2.7
30
78
1
92
36
13
13
36
1.84

Tables:   1

The End!