Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NTFQ01012303.1 Kokia drynarioides strain JFW-HI SEQ_127304, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 93616
ACGTcount: A:0.33, C:0.16, G:0.17, T:0.34
Warning! 52 characters in sequence are not A, C, G, or T
Found at i:1401 original size:27 final size:26
Alignment explanation
Indices: 1353--1405 Score: 63
Period size: 27 Copynumber: 2.0 Consensus size: 26
1343 AATCAAAATC
*
1353 AATTATGAATTTAATAACTTAAATTAA
1 AATTATGAATTCAATAACTT-AATTAA
*
1380 AATTATTAATTCAACTAA-TTAATTAA
1 AATTATGAATTCAA-TAACTTAATTAA
1406 CTCACAAATA
Statistics
Matches: 23, Mismatches: 2, Indels: 3
0.82 0.07 0.11
Matches are distributed among these distances:
26 6 0.26
27 14 0.61
28 3 0.13
ACGTcount: A:0.51, C:0.06, G:0.02, T:0.42
Consensus pattern (26 bp):
AATTATGAATTCAATAACTTAATTAA
Found at i:5363 original size:2 final size:2
Alignment explanation
Indices: 5356--5382 Score: 54
Period size: 2 Copynumber: 13.5 Consensus size: 2
5346 TCATATGGAG
5356 TA TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA T
5383 TTTTTTTTTT
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 25 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Found at i:5392 original size:5 final size:5
Alignment explanation
Indices: 5382--5414 Score: 50
Period size: 5 Copynumber: 6.8 Consensus size: 5
5372 TATATATATA
*
5382 TTTT- TTTTT TTTTC TTTTC TTTTC TTTTC TTTT
1 TTTTC TTTTC TTTTC TTTTC TTTTC TTTTC TTTT
5415 GTCAGCAGAT
Statistics
Matches: 27, Mismatches: 1, Indels: 1
0.93 0.03 0.03
Matches are distributed among these distances:
4 4 0.15
5 23 0.85
ACGTcount: A:0.00, C:0.12, G:0.00, T:0.88
Consensus pattern (5 bp):
TTTTC
Found at i:12659 original size:12 final size:12
Alignment explanation
Indices: 12642--12672 Score: 53
Period size: 12 Copynumber: 2.6 Consensus size: 12
12632 TTGGGCTTCA
12642 CTTCTTCCTCTT
1 CTTCTTCCTCTT
12654 CTTCTTCCTCTT
1 CTTCTTCCTCTT
*
12666 CCTCTTC
1 CTTCTTC
12673 ACCTTCCTCT
Statistics
Matches: 18, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
12 18 1.00
ACGTcount: A:0.00, C:0.45, G:0.00, T:0.55
Consensus pattern (12 bp):
CTTCTTCCTCTT
Found at i:12667 original size:18 final size:18
Alignment explanation
Indices: 12644--12683 Score: 62
Period size: 18 Copynumber: 2.2 Consensus size: 18
12634 GGGCTTCACT
**
12644 TCTTCCTCTTCTTCTTCC
1 TCTTCCTCTTCACCTTCC
12662 TCTTCCTCTTCACCTTCC
1 TCTTCCTCTTCACCTTCC
12680 TCTT
1 TCTT
12684 GTTCTACTTC
Statistics
Matches: 20, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
18 20 1.00
ACGTcount: A:0.03, C:0.45, G:0.00, T:0.53
Consensus pattern (18 bp):
TCTTCCTCTTCACCTTCC
Found at i:15660 original size:2 final size:2
Alignment explanation
Indices: 15653--15684 Score: 55
Period size: 2 Copynumber: 16.0 Consensus size: 2
15643 AGCAAACAGC
*
15653 GA GA GA GA AA GA GA GA GA GA GA GA GA GA GA GA
1 GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA
15685 ATGAGTGTAC
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
2 28 1.00
ACGTcount: A:0.53, C:0.00, G:0.47, T:0.00
Consensus pattern (2 bp):
GA
Found at i:20768 original size:16 final size:16
Alignment explanation
Indices: 20736--20773 Score: 51
Period size: 16 Copynumber: 2.4 Consensus size: 16
20726 GAATGGATTT
* *
20736 TGATTCGTATTTTATG
1 TGATTCGTATGTAATG
20752 TGATTCGTATGTAATG
1 TGATTCGTATGTAATG
20768 TG-TTCG
1 TGATTCG
20774 CACATTTATA
Statistics
Matches: 20, Mismatches: 2, Indels: 1
0.87 0.09 0.04
Matches are distributed among these distances:
15 4 0.20
16 16 0.80
ACGTcount: A:0.18, C:0.08, G:0.24, T:0.50
Consensus pattern (16 bp):
TGATTCGTATGTAATG
Found at i:23051 original size:31 final size:31
Alignment explanation
Indices: 23016--23076 Score: 79
Period size: 31 Copynumber: 2.0 Consensus size: 31
23006 ATCTAGTGAT
23016 TTAAATAAAAATATTT-AAACAATTCAATAAC
1 TTAAATAAAAAT-TTTCAAACAATTCAATAAC
* * *
23047 TTAAATGAAGATTTTCAAATAATTCAATAA
1 TTAAATAAAAATTTTCAAACAATTCAATAA
23077 TTATTTTATA
Statistics
Matches: 26, Mismatches: 3, Indels: 2
0.84 0.10 0.06
Matches are distributed among these distances:
30 3 0.12
31 23 0.88
ACGTcount: A:0.54, C:0.08, G:0.03, T:0.34
Consensus pattern (31 bp):
TTAAATAAAAATTTTCAAACAATTCAATAAC
Found at i:23951 original size:15 final size:15
Alignment explanation
Indices: 23931--23960 Score: 60
Period size: 15 Copynumber: 2.0 Consensus size: 15
23921 CCCGCGAAAT
23931 CTACACCGAAGAAGA
1 CTACACCGAAGAAGA
23946 CTACACCGAAGAAGA
1 CTACACCGAAGAAGA
23961 ATGGAATGAA
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 15 1.00
ACGTcount: A:0.47, C:0.27, G:0.20, T:0.07
Consensus pattern (15 bp):
CTACACCGAAGAAGA
Found at i:36800 original size:2 final size:2
Alignment explanation
Indices: 36795--36838 Score: 88
Period size: 2 Copynumber: 22.0 Consensus size: 2
36785 AAAAAATAAA
36795 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
36837 AT
1 AT
36839 TTCAATTCAG
Statistics
Matches: 42, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 42 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:37253 original size:5 final size:5
Alignment explanation
Indices: 37219--37250 Score: 55
Period size: 5 Copynumber: 6.4 Consensus size: 5
37209 AAAATTGCAG
*
37219 TACAA TACAA TACAA TACAA TACAA TAAAA TA
1 TACAA TACAA TACAA TACAA TACAA TACAA TA
37251 AAAGAAAAGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
5 26 1.00
ACGTcount: A:0.62, C:0.16, G:0.00, T:0.22
Consensus pattern (5 bp):
TACAA
Found at i:37274 original size:6 final size:6
Alignment explanation
Indices: 37263--37290 Score: 56
Period size: 6 Copynumber: 4.7 Consensus size: 6
37253 AGAAAAGAGT
37263 GGGGCA GGGGCA GGGGCA GGGGCA GGGG
1 GGGGCA GGGGCA GGGGCA GGGGCA GGGG
37291 GTGATGATAC
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
6 22 1.00
ACGTcount: A:0.14, C:0.14, G:0.71, T:0.00
Consensus pattern (6 bp):
GGGGCA
Found at i:42326 original size:3 final size:3
Alignment explanation
Indices: 42318--42342 Score: 50
Period size: 3 Copynumber: 8.3 Consensus size: 3
42308 AGACCTCTGA
42318 TTC TTC TTC TTC TTC TTC TTC TTC T
1 TTC TTC TTC TTC TTC TTC TTC TTC T
42343 CCTTACCTTG
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
3 22 1.00
ACGTcount: A:0.00, C:0.32, G:0.00, T:0.68
Consensus pattern (3 bp):
TTC
Found at i:44197 original size:66 final size:66
Alignment explanation
Indices: 44122--44259 Score: 258
Period size: 66 Copynumber: 2.1 Consensus size: 66
44112 AGACCGAACT
*
44122 TAAACAAATATAAAATATGCTAATATCATGAGTAGACATAACCCGAATTCAACCCGACCCAACCC
1 TAAACAAATATAAAATATGCTAATATCATGAGTAGACATAACCCGAATCCAACCCGACCCAACCC
44187 A
66 A
*
44188 TAAACAAATATAAAATATGCTAATATCATGAGTAGACCTAACCCGAATCCAACCCGACCCAACCC
1 TAAACAAATATAAAATATGCTAATATCATGAGTAGACATAACCCGAATCCAACCCGACCCAACCC
44253 A
66 A
44254 TAAACA
1 TAAACA
44260 TCTCTATATT
Statistics
Matches: 70, Mismatches: 2, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
66 70 1.00
ACGTcount: A:0.46, C:0.27, G:0.09, T:0.19
Consensus pattern (66 bp):
TAAACAAATATAAAATATGCTAATATCATGAGTAGACATAACCCGAATCCAACCCGACCCAACCC
A
Found at i:46555 original size:6 final size:6
Alignment explanation
Indices: 46540--46573 Score: 52
Period size: 6 Copynumber: 5.8 Consensus size: 6
46530 CGCAAAAACG
*
46540 GGGC-T GGGCTT GGGCTT GGGCTT AGGCTT GGGCT
1 GGGCTT GGGCTT GGGCTT GGGCTT GGGCTT GGGCT
46574 ATAAATATCT
Statistics
Matches: 26, Mismatches: 2, Indels: 1
0.90 0.07 0.03
Matches are distributed among these distances:
5 4 0.15
6 22 0.85
ACGTcount: A:0.03, C:0.18, G:0.50, T:0.29
Consensus pattern (6 bp):
GGGCTT
Found at i:46697 original size:22 final size:22
Alignment explanation
Indices: 46663--46715 Score: 63
Period size: 23 Copynumber: 2.4 Consensus size: 22
46653 ATGTTAATGT
46663 TTATTGTTTATATTT-TAATTGA
1 TTATT-TTTATATTTATAATTGA
*
46685 TTATTTTTAATATTTATAATTTA
1 TTATTTTT-ATATTTATAATTGA
*
46708 TAATTTTT
1 TTATTTTT
46716 GAATTTTGAA
Statistics
Matches: 27, Mismatches: 2, Indels: 3
0.84 0.06 0.09
Matches are distributed among these distances:
21 3 0.11
22 11 0.41
23 13 0.48
ACGTcount: A:0.30, C:0.00, G:0.04, T:0.66
Consensus pattern (22 bp):
TTATTTTTATATTTATAATTGA
Found at i:52711 original size:185 final size:187
Alignment explanation
Indices: 52360--52755 Score: 558
Period size: 185 Copynumber: 2.2 Consensus size: 187
52350 CATATTACTG
* * * *
52360 CTGTAAAAGCTTTTAGCCTTTGAC---T--TTTAGAACAGGTAAATCTATCTTTTATGTTCATCA
1 CTGTAAAAGCTTTTAGCCTTCGACTTTTAATTTAGAACAGGTAAACCTAGCTTTTATATTCATCA
* * * *
52420 TCTCTTGATAATATCAGATTTAGATCATCCTAGCAGTGTCATTGAACACTGCAAAAATCCCTAAG
66 TCTCATGATAATATCAGATTTAGATCAACCTACCAGTGCCATTGAACACTGCAAAAATCCCTAAG
*
52485 CCTGTTATGCCACATTATTCACGCGCTATTAGGTCATCCTACCAGTGTCATTGAACA
131 CCTGTTATGCCACATTATTCACGCGCTATTAGGTCATCCTACCAGTGTCATTAAACA
* *
52542 CTGTAAAAGCTTTTAGTCTTCGACTTTTAATTTAGAACTGGTAAACCTAGCTTTTATATTCATCA
1 CTGTAAAAGCTTTTAGCCTTCGACTTTTAATTTAGAACAGGTAAACCTAGCTTTTATATTCATCA
* *
52607 TCTCATGATAATATCATATTTAGATCAACCTACCAGTGCCATTG-AC-C-GCTAAAAATCCCTGA
66 TCTCATGATAATATCAGATTTAGATCAACCTACCAGTGCCATTGAACACTGC-AAAAATCCCTAA
* * *
52669 -TCTCGTTATGCCACATTATTCATGCGCTATTAGGTTATCCTACCAGTGTCATTAAACA
130 GCCT-GTTATGCCACATTATTCACGCGCTATTAGGTCATCCTACCAGTGTCATTAAACA
*
52727 CTGTAAAAGCTTTTAGCCTTTGACTTTTA
1 CTGTAAAAGCTTTTAGCCTTCGACTTTTA
52756 GAAATGGTAA
Statistics
Matches: 189, Mismatches: 18, Indels: 11
0.87 0.08 0.05
Matches are distributed among these distances:
182 22 0.12
184 4 0.02
185 91 0.48
186 2 0.01
187 70 0.37
ACGTcount: A:0.29, C:0.22, G:0.13, T:0.36
Consensus pattern (187 bp):
CTGTAAAAGCTTTTAGCCTTCGACTTTTAATTTAGAACAGGTAAACCTAGCTTTTATATTCATCA
TCTCATGATAATATCAGATTTAGATCAACCTACCAGTGCCATTGAACACTGCAAAAATCCCTAAG
CCTGTTATGCCACATTATTCACGCGCTATTAGGTCATCCTACCAGTGTCATTAAACA
Found at i:57545 original size:22 final size:23
Alignment explanation
Indices: 57497--57545 Score: 57
Period size: 22 Copynumber: 2.2 Consensus size: 23
57487 CATGCGTTGT
* *
57497 GTAATATCCAAATAGTAACAATA
1 GTAATAACCAAATAATAACAATA
*
57520 -TAATAACGAAATAATAACAA-A
1 GTAATAACCAAATAATAACAATA
57541 GTAAT
1 GTAAT
57546 GAAAAAAAAA
Statistics
Matches: 22, Mismatches: 3, Indels: 3
0.79 0.11 0.11
Matches are distributed among these distances:
21 1 0.05
22 21 0.95
ACGTcount: A:0.57, C:0.10, G:0.08, T:0.24
Consensus pattern (23 bp):
GTAATAACCAAATAATAACAATA
Found at i:57806 original size:39 final size:39
Alignment explanation
Indices: 57739--57899 Score: 157
Period size: 39 Copynumber: 4.2 Consensus size: 39
57729 AGACAGCTCT
** *
57739 AAATTGATCTATTCAATTGTTTTTTAAAATTGAATTGTA
1 AAATTGATCTATTCAATCATTTTCTAAAATTGAATTGTA
*
57778 AAATTGATCTATTCGATCATTTTCTAAAATTGAATTGTA
1 AAATTGATCTATTCAATCATTTTCTAAAATTGAATTGTA
* * *
57817 AGAA-TCATCTATTCAAT-ATTTT-TAGAATTGAATAGTA
1 A-AATTGATCTATTCAATCATTTTCTAAAATTGAATTGTA
*** * * * *
57854 GGGTTGATTTATTCAATCATTTTCTAGAATTAAATTGCA
1 AAATTGATCTATTCAATCATTTTCTAAAATTGAATTGTA
*
57893 AAGTTGA
1 AAATTGA
57900 CGCATTGGAT
Statistics
Matches: 100, Mismatches: 18, Indels: 8
0.79 0.14 0.06
Matches are distributed among these distances:
37 24 0.24
38 10 0.10
39 64 0.64
40 2 0.02
ACGTcount: A:0.36, C:0.08, G:0.12, T:0.43
Consensus pattern (39 bp):
AAATTGATCTATTCAATCATTTTCTAAAATTGAATTGTA
Found at i:57873 original size:76 final size:78
Alignment explanation
Indices: 57745--57890 Score: 188
Period size: 76 Copynumber: 1.9 Consensus size: 78
57735 CTCTAAATTG
* * * *
57745 ATCTATTCAATTGTTTTTTAAAATTGAATTGTAAAATTGATCTATTCGATCATTTTCTAAAATTG
1 ATCTATTCAATTGATTTTTAAAATTGAATAGTAAAATTGATCTATTCAATCATTTTCTAAAATTA
57810 AATTGTAAGAATC
66 AATTGTAAGAATC
* *** * *
57823 ATCTATTCAA-T-ATTTTTAGAATTGAATAGTAGGGTTGATTTATTCAATCATTTTCTAGAATTA
1 ATCTATTCAATTGATTTTTAAAATTGAATAGTAAAATTGATCTATTCAATCATTTTCTAAAATTA
57886 AATTG
66 AATTG
57891 CAAAGTTGAC
Statistics
Matches: 58, Mismatches: 10, Indels: 2
0.83 0.14 0.03
Matches are distributed among these distances:
76 47 0.81
77 1 0.02
78 10 0.17
ACGTcount: A:0.35, C:0.08, G:0.12, T:0.45
Consensus pattern (78 bp):
ATCTATTCAATTGATTTTTAAAATTGAATAGTAAAATTGATCTATTCAATCATTTTCTAAAATTA
AATTGTAAGAATC
Found at i:58328 original size:16 final size:17
Alignment explanation
Indices: 58291--58328 Score: 53
Period size: 18 Copynumber: 2.3 Consensus size: 17
58281 AATTTATAAT
58291 ATTT-TATATTATGTTA
1 ATTTATATATTATGTTA
58307 ACTTTATATATTATG-TA
1 A-TTTATATATTATGTTA
58324 ATTTA
1 ATTTA
58329 AAACACATAA
Statistics
Matches: 20, Mismatches: 0, Indels: 4
0.83 0.00 0.17
Matches are distributed among these distances:
16 5 0.25
17 6 0.30
18 9 0.45
ACGTcount: A:0.34, C:0.03, G:0.05, T:0.58
Consensus pattern (17 bp):
ATTTATATATTATGTTA
Found at i:67785 original size:123 final size:123
Alignment explanation
Indices: 67623--67871 Score: 462
Period size: 123 Copynumber: 2.0 Consensus size: 123
67613 CCATCAAACA
*
67623 ATACCAAATAAAGAGGACCAATCCACATCCTAAAAGACTAAATCAAATTTATTCCTCAAATTAGC
1 ATACCAAATAAAGACGACCAATCCACATCCTAAAAGACTAAATCAAATTTATTCCTCAAATTAGC
67688 AAAAAGCCAATCCTCCAACTAATAATAGAAAATTCGAGACAATAGCCTCGACGGAATG
66 AAAAAGCCAATCCTCCAACTAATAATAGAAAATTCGAGACAATAGCCTCGACGGAATG
*
67746 ATACCAAATAAAGACGACCAATCCACATCCTGAAAGACTAAATCAAATTTATTCCTCAAATTAGC
1 ATACCAAATAAAGACGACCAATCCACATCCTAAAAGACTAAATCAAATTTATTCCTCAAATTAGC
* *
67811 AAAAAGTCAATCCTCCAACTAATAATAGAAAATTCGAGACAATAGCCTCGATGGAATG
66 AAAAAGCCAATCCTCCAACTAATAATAGAAAATTCGAGACAATAGCCTCGACGGAATG
67869 ATA
1 ATA
67872 TGCTCCCACA
Statistics
Matches: 122, Mismatches: 4, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
123 122 1.00
ACGTcount: A:0.45, C:0.22, G:0.11, T:0.21
Consensus pattern (123 bp):
ATACCAAATAAAGACGACCAATCCACATCCTAAAAGACTAAATCAAATTTATTCCTCAAATTAGC
AAAAAGCCAATCCTCCAACTAATAATAGAAAATTCGAGACAATAGCCTCGACGGAATG
Found at i:71440 original size:23 final size:23
Alignment explanation
Indices: 71414--71465 Score: 59
Period size: 23 Copynumber: 2.3 Consensus size: 23
71404 TTTATCGTTT
*
71414 GTTTATTATTCATAAACATGTTC
1 GTTTAATATTCATAAACATGTTC
* * *
71437 GTTTAATGTTCGTGAACATGTTC
1 GTTTAATATTCATAAACATGTTC
*
71460 GGTTAA
1 GTTTAA
71466 GTTAAATGAA
Statistics
Matches: 24, Mismatches: 5, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
23 24 1.00
ACGTcount: A:0.27, C:0.12, G:0.17, T:0.44
Consensus pattern (23 bp):
GTTTAATATTCATAAACATGTTC
Found at i:74613 original size:22 final size:22
Alignment explanation
Indices: 74577--74618 Score: 66
Period size: 22 Copynumber: 1.9 Consensus size: 22
74567 CCTCAAACCC
* *
74577 AAACCTTAAATCTTGAATCTTA
1 AAACCTCAAACCTTGAATCTTA
74599 AAACCTCAAACCTTGAATCT
1 AAACCTCAAACCTTGAATCT
74619 CGAACCCACA
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
22 18 1.00
ACGTcount: A:0.40, C:0.24, G:0.05, T:0.31
Consensus pattern (22 bp):
AAACCTCAAACCTTGAATCTTA
Found at i:78268 original size:31 final size:30
Alignment explanation
Indices: 78205--78282 Score: 95
Period size: 30 Copynumber: 2.6 Consensus size: 30
78195 AATAGTTTAT
*
78205 ATTTTTATAATTTTTAAAATATTAAATTAA
1 ATTTTTATAATTTTTAAAAGATTAAATTAA
*
78235 ATTTTTATTAA-TTTTAAAAGATTAATTTAA
1 ATTTTTA-TAATTTTTAAAAGATTAAATTAA
* * *
78265 AATTTTAAAAATTTTAAA
1 ATTTTTATAATTTTTAAA
78283 TGAAAAATCC
Statistics
Matches: 42, Mismatches: 4, Indels: 4
0.84 0.08 0.08
Matches are distributed among these distances:
29 2 0.05
30 37 0.88
31 3 0.07
ACGTcount: A:0.47, C:0.00, G:0.01, T:0.51
Consensus pattern (30 bp):
ATTTTTATAATTTTTAAAAGATTAAATTAA
Found at i:84587 original size:18 final size:18
Alignment explanation
Indices: 84564--84608 Score: 63
Period size: 18 Copynumber: 2.5 Consensus size: 18
84554 TAATTTTATA
84564 TGGATTCTATTTTACCAT
1 TGGATTCTATTTTACCAT
* **
84582 TGGATTCTGTTTTTTCAT
1 TGGATTCTATTTTACCAT
84600 TGGATTCTA
1 TGGATTCTA
84609 AATTTCCCAA
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
18 23 1.00
ACGTcount: A:0.18, C:0.13, G:0.16, T:0.53
Consensus pattern (18 bp):
TGGATTCTATTTTACCAT
Done.