Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012310.1 Kokia drynarioides strain JFW-HI SEQ_127311, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61410

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1337--1421
43
2.0
43
83
4
109
30
10
10
48
1.72
1999--2071
38
1.9
38
94
0
128
31
28
21
17
1.97
5638--5726
4
21.2
4
84
6
106
2
28
0
69
1.00
5637--5727
21
4.5
21
75
18
95
2
29
0
68
1.02
5885--5936
27
2.0
26
88
3
77
28
36
13
21
1.91
6332--6362
6
5.3
6
96
3
55
83
0
16
0
0.64
7667--7704
20
1.9
20
88
0
58
31
10
0
57
1.32
8877--9305
213
2.0
213
97
0
813
34
13
20
31
1.91
19929--19963
2
17.5
2
100
0
70
48
0
0
51
1.00
27918--27967
24
2.1
24
100
0
100
46
12
26
16
1.81
28299--28361
31
2.0
31
96
0
117
47
9
1
41
1.45
29293--29330
17
2.3
17
86
4
51
63
0
5
31
1.17
31497--31800
151
2.0
151
98
0
581
31
18
19
30
1.95
34242--34374
65
2.0
65
88
2
196
30
18
16
35
1.93
37785--37827
21
2.1
21
86
4
61
32
4
32
30
1.78
42790--42818
3
9.7
3
100
0
58
31
0
0
68
0.89
43406--43439
17
1.9
18
88
5
52
44
0
11
44
1.40
44896--44957
31
2.0
31
83
0
79
37
12
8
41
1.73
45348--45410
24
2.6
24
82
0
81
25
12
11
50
1.73
47326--47376
24
2.1
24
92
0
84
25
9
5
58
1.52
47326--47392
24
2.8
25
84
11
77
28
11
5
53
1.61
49315--49379
24
2.7
24
87
0
94
24
13
12
49
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49735--49781
23
2.0
23
100
0
94
25
4
0
70
1.05
49732--49814
16
5.1
16
71
24
59
30
4
0
65
1.14
49762--49827
34
2.0
33
90
3
105
28
6
1
63
1.27
51713--51740
2
14.0
2
100
0
56
50
0
0
50
1.00
55131--55167
6
6.2
6
93
0
65
35
16
48
0
1.46
58811--58854
18
2.3
18
84
11
52
47
11
2
38
1.52
60642--60689
23
2.1
23
92
7
80
43
22
25
8
1.81

Tables:   1

The End!