Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012317.1 Kokia drynarioides strain JFW-HI SEQ_127319, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  203848

Tables:   1   

This is table  1  of  1  ( 58 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9886--9939
16
3.4
16
77
10
56
55
1
29
12
1.48
15138--15183
23
2.0
24
83
8
60
39
4
8
47
1.54
18706--18896
97
2.0
97
94
0
337
35
16
19
28
1.94
19026--19060
14
2.4
15
90
4
54
71
2
5
20
1.19
19268--19369
28
3.6
28
84
7
84
31
5
31
31
1.81
19293--19369
28
2.7
27
90
6
109
29
5
35
29
1.79
25331--25371
17
2.4
17
83
0
55
63
0
2
34
1.08
34074--34099
8
3.2
8
100
0
52
34
23
0
42
1.54
40164--40221
23
2.6
23
86
2
55
15
20
25
37
1.92
41323--41374
26
2.0
26
85
7
70
36
11
7
44
1.70
41434--41498
33
2.0
33
100
0
130
32
18
9
40
1.82
44306--44346
20
2.0
20
100
0
82
9
43
9
36
1.71
55264--55305
22
1.9
22
85
0
57
59
4
11
23
1.51
57883--57930
24
1.9
26
84
16
66
45
0
22
31
1.53
57993--58045
23
2.3
23
90
0
79
11
20
22
45
1.83
58005--58063
23
2.6
23
86
0
73
10
23
23
42
1.85
58025--58142
46
2.6
47
70
20
104
14
20
23
41
1.89
58058--58132
23
3.3
23
83
7
91
16
17
29
37
1.91
61089--61135
15
3.1
15
75
12
51
76
6
12
4
1.12
61401--61461
29
2.1
28
82
14
72
49
0
3
47
1.18
61478--61542
29
2.2
29
80
2
85
55
6
0
38
1.25
69927--69993
29
2.3
29
87
2
91
58
2
8
29
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
87074--87433
201
1.8
191
85
5
495
26
27
18
27
1.98
89756--89935
89
2.0
89
98
0
351
38
22
22
16
1.93
92426--92472
16
2.8
17
77
6
51
61
2
4
31
1.27
94763--94813
24
2.1
25
85
3
68
27
13
13
45
1.82
99587--99695
57
1.9
57
83
7
141
29
11
13
45
1.78
103270--103352
35
2.4
35
80
11
93
65
4
2
27
1.26
103269--103359
34
2.7
33
78
14
96
63
4
2
29
1.25
107839--107898
30
2.0
30
100
0
120
30
20
6
43
1.77
121389--121445
25
2.3
25
84
6
71
50
1
0
47
1.11
121995--122036
15
2.8
16
89
7
61
73
0
0
26
0.83
122493--122527
17
2.0
18
88
5
54
45
5
0
48
1.26
123329--123361
15
2.2
15
89
10
50
81
3
0
15
0.80
124272--124339
31
2.2
31
84
5
84
55
2
2
38
1.30
126996--127036
16
2.6
16
88
7
57
68
0
14
17
1.22
129997--130025
7
4.1
7
100
0
58
27
27
17
27
1.97
131762--131803
21
2.0
21
90
0
66
38
9
42
9
1.70
140249--140281
15
2.2
15
89
10
50
24
6
12
57
1.57
140249--140281
8
4.4
8
96
3
52
24
6
12
57
1.57
146474--146501
3
9.3
3
100
0
56
32
0
32
35
1.58
153197--153235
15
2.7
15
88
4
53
48
0
0
51
1.00
153205--153243
16
2.4
17
83
12
55
51
0
0
48
1.00
154297--154347
25
2.0
25
81
7
59
49
3
7
39
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
164174--164211
20
1.9
20
84
10
51
15
2
2
78
0.97
171635--171675
2
20.5
2
100
0
82
51
0
0
48
1.00
173303--173379
21
3.7
21
74
5
68
23
1
20
54
1.52
174290--174379
44
2.0
44
91
0
144
16
18
23
41
1.90
175540--175620
17
4.3
18
76
10
67
61
2
0
35
1.09
175540--175602
17
3.2
21
78
19
82
63
3
0
33
1.10
177309--177342
2
17.0
2
100
0
68
50
0
0
50
1.00
181437--181512
30
2.5
30
91
0
116
25
52
6
15
1.67
200371--200414
8
5.5
8
100
0
88
75
0
13
11
1.06
200744--200782
19
2.0
20
85
5
53
25
5
2
66
1.25
202172--202210
21
1.9
21
89
5
62
61
0
0
38
0.96
203422--203459
11
3.5
11
85
7
60
73
5
2
18
1.14
203421--203465
11
4.3
11
80
8
58
71
4
6
17
1.25
203421--203465
21
2.1
21
100
0
90
71
4
6
17
1.25

Tables:   1

The End!