Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012329.1 Kokia drynarioides strain JFW-HI SEQ_127331, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  151005

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
948--1100
74
2.1
74
92
0
252
39
16
10
33
1.83
2906--3325
219
1.9
219
99
0
822
33
14
16
35
1.89
3176--3233
31
1.9
29
82
6
71
37
0
1
60
1.07
6564--6594
2
15.5
2
100
0
62
48
0
0
51
1.00
10473--10555
34
2.4
34
100
0
166
16
18
7
57
1.61
31039--31216
52
3.5
52
85
6
229
37
23
12
26
1.91
38264--38314
24
2.1
24
88
0
75
23
9
9
56
1.61
38272--38326
24
2.3
24
84
6
67
29
12
9
49
1.72
42515--42573
29
2.0
30
86
3
84
49
15
6
28
1.70
49718--49751
14
2.4
14
85
0
50
47
2
5
44
1.42
54737--54778
21
2.0
21
90
4
68
30
0
0
69
0.89
54910--54953
15
2.7
17
79
10
56
59
0
0
40
0.98
54910--54951
16
2.6
16
81
7
50
59
0
0
40
0.97
55370--55410
17
2.5
16
85
14
57
39
9
2
48
1.49
62575--62605
16
1.9
16
93
0
53
22
9
32
35
1.87
62808--62881
17
4.4
17
80
0
94
35
2
5
56
1.36
63555--63685
3
42.3
3
69
11
68
57
4
3
34
1.37
74015--74162
77
1.9
77
92
0
251
43
19
16
20
1.88
76199--76287
45
2.0
44
88
2
133
40
23
25
10
1.86
76013--76474
238
1.9
235
81
9
555
39
19
24
16
1.91
76243--76533
98
3.0
100
80
7
287
38
19
25
15
1.92
77002--77068
34
2.0
34
87
0
98
32
5
7
53
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77754--77877
3
40.3
3
69
13
65
57
4
4
33
1.39
78951--79045
29
3.2
28
74
11
82
41
16
1
41
1.56
78961--79112
30
5.2
29
74
10
114
38
21
1
38
1.62
79073--79464
58
6.7
57
79
8
366
31
23
4
40
1.75
79132--79451
30
11.0
30
69
13
177
31
23
5
39
1.76
79080--79464
116
3.3
115
82
9
412
31
23
4
40
1.75
79080--79536
116
3.9
113
79
11
396
30
23
5
39
1.78
79487--79547
28
2.2
28
85
5
79
32
26
11
29
1.91
92688--92718
15
2.1
15
93
0
53
77
0
12
9
0.99
101869--101896
2
14.0
2
100
0
56
50
0
0
50
1.00
113017--113069
22
2.5
21
87
3
70
64
1
3
30
1.22
113029--113069
21
1.9
21
90
5
64
65
2
4
26
1.25
114890--114926
19
1.9
19
100
0
74
51
10
16
21
1.74
119707--119747
21
2.1
19
90
9
64
60
0
4
34
1.18
124945--124980
2
18.0
2
94
0
63
47
0
2
50
1.15
127954--127998
21
2.1
21
87
0
63
40
35
0
24
1.56
128105--128162
14
4.1
14
73
4
53
27
17
27
27
1.97
128820--128870
15
3.3
15
72
5
57
7
5
21
64
1.41
130656--130691
3
12.0
3
93
0
63
66
0
30
2
1.06
133761--134006
123
2.0
122
97
0
456
34
7
15
41
1.76
134525--134616
41
2.2
41
100
0
184
25
8
29
36
1.86
135396--135429
15
2.3
15
90
5
52
47
8
17
26
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
149107--149156
27
1.9
25
84
8
64
42
2
10
46
1.49
149542--149595
23
2.5
22
82
11
58
44
0
7
48
1.31
150101--150156
28
2.0
28
92
0
94
12
7
21
58
1.57

Tables:   1

The End!