Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012342.1 Kokia drynarioides strain JFW-HI SEQ_127344, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96128

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1631--1680
25
1.9
27
84
8
68
30
6
8
56
1.52
3350--3406
30
1.9
30
85
7
80
26
5
3
64
1.30
6604--6648
2
22.5
2
95
0
81
0
53
0
46
1.00
8376--8615
123
2.0
123
98
0
462
25
22
16
36
1.94
8941--8972
16
2.0
16
93
0
55
28
34
6
31
1.82
17034--17059
10
2.6
10
100
0
52
65
7
0
26
1.20
18173--18230
30
2.0
29
89
3
89
60
13
5
20
1.53
19499--19552
23
2.3
23
90
6
83
37
11
14
37
1.82
19665--19713
20
2.5
20
77
12
55
57
10
0
32
1.32
22646--22676
9
3.4
9
95
0
53
32
25
41
0
1.56
22731--22937
102
2.0
102
94
0
360
34
18
24
22
1.96
23458--24001
226
2.4
228
91
6
874
34
6
11
47
1.66
24848--24889
17
2.4
18
81
18
54
61
0
7
30
1.22
29523--29569
12
3.9
12
81
13
53
17
19
19
44
1.87
29523--29569
24
2.0
24
86
0
67
17
19
19
44
1.87
34255--34432
88
2.0
88
96
0
329
30
23
7
38
1.82
37337--37365
2
14.5
2
100
0
58
51
0
0
48
1.00
38066--38120
22
2.5
21
77
8
65
61
0
1
36
1.06
43911--43972
31
2.0
30
84
9
81
46
9
17
25
1.79
43942--43991
24
2.1
24
92
0
82
54
8
16
22
1.68
49101--49277
72
2.5
73
85
3
234
19
23
13
43
1.86
53225--53264
18
2.2
19
86
4
55
55
5
0
40
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53225--53267
19
2.3
19
84
8
52
53
4
0
41
1.21
55239--55299
25
2.5
26
76
10
65
32
0
0
67
0.91
55971--55996
2
13.0
2
100
0
52
50
0
0
50
1.00
56739--56780
19
2.2
19
83
8
50
9
11
9
69
1.38
58396--58429
15
2.2
16
89
5
52
50
0
0
50
1.00
74356--74382
6
4.5
6
100
0
54
33
29
18
18
1.95
75417--75455
18
2.2
18
86
4
53
41
0
0
58
0.98
77132--77169
18
2.1
18
85
9
51
21
2
10
65
1.35
79017--79076
21
2.9
21
80
2
59
10
1
21
66
1.30
79116--79166
20
2.4
22
83
6
61
7
5
15
70
1.30
89259--89294
18
2.0
19
89
10
58
58
0
41
0
0.98

Tables:   1

The End!