Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012359.1 Kokia drynarioides strain JFW-HI SEQ_127361, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27123

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86--110
13
1.9
13
100
0
50
48
24
16
12
1.79
6313--6468
80
2.0
78
92
2
258
35
21
14
28
1.93
7228--10687
216
16.6
216
77
10
3166
28
16
14
40
1.88
9324--9365
21
2.0
21
81
9
50
26
9
14
50
1.73
6927--10498
832
4.3
821
85
6
3890
28
16
14
40
1.88
10373--10414
21
2.0
21
81
9
50
26
9
14
50
1.73
12605--12641
18
2.1
18
89
0
56
27
24
10
37
1.88
14338--14487
74
2.0
74
96
0
273
39
14
12
33
1.84
14749--14782
2
17.5
2
93
6
61
50
50
0
0
1.00
15262--15858
215
2.8
215
82
6
670
28
16
13
41
1.86
15858--15896
15
2.6
15
83
0
51
33
20
30
15
1.94
22947--23077
50
2.6
50
85
6
165
37
12
14
35
1.84
23295--23425
50
2.6
50
85
6
165
37
12
14
35
1.84
23467--23531
33
1.9
34
84
3
87
44
7
13
33
1.73
23630--23662
16
2.0
17
94
5
59
72
0
0
27
0.85
24562--25871
216
6.2
216
79
8
1271
28
16
14
40
1.88
24551--25871
632
2.1
629
82
6
1589
28
16
14
40
1.88
27008--27123
50
2.3
51
85
5
155
37
11
15
36
1.83

Tables:   1

The End!