Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012372.1 Kokia drynarioides strain JFW-HI SEQ_127376, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  124438

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6342--6392
12
4.4
11
75
20
50
58
1
0
39
1.09
12185--12249
30
2.2
30
88
0
94
56
15
4
23
1.57
23484--23524
21
2.0
21
85
0
55
46
0
0
53
1.00
48180--48222
22
1.9
22
85
4
59
37
0
2
60
1.10
51383--51424
22
1.9
22
90
0
66
26
2
2
69
1.13
51367--51426
28
2.1
28
84
6
77
25
1
3
70
1.12
51367--51424
29
2.0
29
83
12
75
25
1
3
68
1.14
52078--52148
7
10.1
7
74
17
67
71
4
0
23
1.03
52094--52148
20
2.7
20
85
2
74
72
5
0
21
1.04
52075--52146
28
2.4
30
84
6
94
72
4
0
23
1.02
55821--55859
8
4.9
8
83
0
51
41
5
10
43
1.61
60168--60201
3
11.3
3
100
0
68
67
0
32
0
0.91
60489--60517
5
6.0
5
92
8
51
82
17
0
0
0.66
77825--77868
22
2.0
23
86
4
63
43
0
2
54
1.12
80469--80638
83
2.0
83
96
2
315
33
18
20
27
1.96
81484--81524
2
20.5
2
100
0
82
48
0
51
0
1.00
99658--99713
28
2.0
28
82
3
69
46
0
3
50
1.19
103879--103938
29
2.1
28
81
6
68
30
1
11
56
1.45
104066--104108
18
2.4
18
80
7
52
51
0
2
46
1.13
105698--105749
26
2.0
25
81
3
59
50
7
15
26
1.71
105742--105782
21
1.9
22
90
5
66
43
4
9
41
1.59
111789--111831
21
2.0
21
90
0
68
55
13
6
23
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
119988--120026
17
2.3
17
86
0
60
17
10
23
48
1.78
120016--120111
41
2.3
41
92
0
165
27
6
28
38
1.81
121070--121122
24
2.2
24
80
6
63
52
0
1
45
1.11

Tables:   1

The End!