Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012375.1 Kokia drynarioides strain JFW-HI SEQ_127379, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  126766

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1422--1476
29
2.0
28
82
13
69
41
7
3
47
1.49
4013--4043
16
1.9
16
93
0
53
38
0
22
38
1.54
6198--6435
121
2.0
121
94
1
424
43
19
16
19
1.88
8747--8776
12
2.4
13
94
5
53
36
0
0
63
0.95
17179--17231
14
3.6
14
78
9
61
26
3
0
69
1.05
28946--28989
15
3.0
14
83
6
52
36
9
0
54
1.32
37209--37256
26
1.9
26
87
8
73
54
4
2
39
1.32
37251--37276
12
2.2
12
100
0
52
69
7
0
23
1.14
37972--38014
22
1.9
23
90
4
70
69
2
2
25
1.12
45079--45556
240
2.0
240
96
0
875
38
14
20
25
1.91
46198--46241
22
2.0
22
90
0
70
25
29
11
34
1.91
46464--46496
2
16.5
2
100
0
66
51
0
48
0
1.00
65134--65229
23
4.2
22
78
5
93
38
26
22
12
1.90
67674--67761
23
3.8
23
81
11
101
39
25
21
13
1.90
67672--67773
23
4.5
21
76
13
80
42
23
20
13
1.88
68377--68405
10
2.7
11
89
10
51
27
6
0
65
1.18
69098--69218
29
4.1
29
84
10
172
52
2
14
31
1.55
69106--69228
61
2.0
61
100
0
246
54
1
13
30
1.48
70531--70570
21
1.9
21
85
10
55
55
0
5
40
1.22
71172--71219
16
2.9
16
78
3
51
41
18
6
33
1.76
75285--75316
2
16.0
2
100
0
64
50
0
0
50
1.00
83512--83538
2
13.5
2
100
0
54
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83768--83819
17
3.2
16
78
7
61
53
13
0
32
1.40
88050--88076
2
13.5
2
100
0
54
48
0
0
51
1.00
88505--88553
19
2.7
19
81
6
57
59
4
4
32
1.35
88447--88612
81
2.0
82
98
1
325
44
2
8
44
1.47
89695--89784
44
2.0
44
85
4
119
45
5
1
47
1.33
89737--89771
18
2.0
17
94
5
61
48
0
0
51
1.00
99797--99908
56
2.0
56
100
0
224
35
12
17
33
1.88
101016--101056
21
2.0
20
85
4
55
34
2
0
63
1.08
102966--103024
18
3.2
18
83
11
66
76
1
18
3
1.02
102984--103051
26
2.7
25
80
8
75
73
0
25
1
0.92
102982--103034
18
3.0
18
83
2
63
75
0
22
1
0.90
103014--103058
23
2.0
23
82
8
56
64
2
26
6
1.30
104893--104931
20
2.1
19
90
9
62
15
0
12
71
1.14
105026--105088
27
2.2
29
83
5
76
36
1
1
60
1.16
113577--113674
49
2.0
49
100
0
196
28
28
12
30
1.93
115259--115302
17
2.6
17
82
3
54
63
2
9
25
1.35
119239--119283
19
2.3
19
81
11
56
48
8
6
35
1.61
122245--122309
28
2.3
29
86
2
87
27
0
3
69
1.03
122256--122290
17
2.1
18
89
10
56
22
0
5
71
1.07
123725--123784
24
2.6
23
79
10
68
66
3
1
28
1.17
124140--124182
10
4.2
10
79
5
50
34
0
4
60
1.17

Tables:   1

The End!