Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012385.1 Kokia drynarioides strain JFW-HI SEQ_127389, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  103033

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3081--3135
4
13.8
4
96
0
101
27
0
25
47
1.52
4746--4838
44
2.1
44
86
4
125
49
9
10
30
1.70
4903--4966
29
2.2
29
85
0
83
59
6
1
32
1.32
10050--10083
15
2.3
15
90
5
52
26
0
2
70
1.01
19243--19271
3
9.7
3
100
0
58
0
31
0
68
0.89
20319--20375
25
2.2
24
82
11
69
43
0
5
50
1.24
21242--21274
17
1.9
17
88
11
50
30
3
9
57
1.45
32744--33009
133
2.0
133
99
0
523
29
15
29
25
1.95
34114--34247
50
2.5
54
75
18
152
50
5
3
40
1.42
34150--34276
50
2.5
50
98
0
245
47
9
6
37
1.61
34710--34796
10
8.9
10
66
14
56
39
2
0
58
1.11
34720--34830
30
3.7
30
97
0
204
42
3
0
54
1.18
34441--34814
208
1.8
206
88
5
585
41
6
7
44
1.59
34717--34847
60
2.2
59
84
9
183
41
4
0
52
1.27
50546--50675
65
2.0
65
95
0
233
43
2
12
42
1.55
59563--59596
1
34.0
1
100
0
68
100
0
0
0
0.00
59607--59640
1
34.0
1
100
0
68
100
0
0
0
0.00
60936--60965
14
2.1
14
93
0
51
0
20
0
80
0.72
66426--66509
33
2.5
34
98
1
161
47
9
14
28
1.75
66858--66987
65
2.0
65
98
0
251
36
9
8
45
1.67
68444--68635
96
2.0
96
85
6
264
38
11
18
31
1.87
68897--68987
30
3.1
29
79
4
101
34
5
25
35
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68871--69312
29
15.0
29
73
12
296
33
4
28
34
1.76
68911--69312
88
4.5
90
75
10
325
32
4
27
35
1.76
68871--69312
59
7.5
58
76
10
312
33
4
28
34
1.76
70245--70312
3
22.0
3
80
8
57
39
1
1
57
1.17
70244--70311
22
3.1
22
67
14
59
38
1
1
58
1.16
71012--71093
6
14.3
6
67
19
50
51
2
1
45
1.22
71015--71093
17
4.6
17
80
4
97
51
2
1
44
1.23
72175--72212
20
1.9
20
88
0
58
42
0
0
57
0.98
73176--73288
21
5.4
21
68
20
76
69
5
4
21
1.27
73127--73279
72
2.1
72
82
9
179
66
3
7
22
1.34
73251--73288
4
9.8
4
83
16
53
73
2
0
23
0.95
73169--73288
14
8.0
15
67
17
54
69
5
4
21
1.25
73489--73562
13
5.5
13
71
18
53
72
5
1
20
1.11
83031--83196
86
1.9
85
93
1
287
45
4
10
39
1.59
86108--86166
27
2.2
26
82
11
75
38
1
0
59
1.08
96013--96037
7
3.6
7
100
0
50
88
0
12
0
0.53
98066--98095
13
2.3
13
94
0
51
80
0
0
20
0.72
102181--102235
21
2.5
21
75
21
51
70
0
25
3
1.03
102197--102256
17
3.7
17
69
10
54
70
0
28
1
0.97
102439--102524
12
7.1
12
70
25
56
24
1
8
66
1.26
102439--102516
23
3.3
22
71
18
59
25
1
6
66
1.23
102897--102995
30
3.3
30
72
13
114
56
8
1
34
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102897--102946
16
3.2
16
71
21
52
60
6
0
34
1.21
102906--103031
59
2.1
59
94
0
216
53
11
1
32
1.47

Tables:   1

The End!